Job Description P33195 Confidence 99.42% Date Thu Jan 5 11:51:15 GMT 2012 Rank 160 Aligned Residues 285 % Identity 18% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.					.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	.	.	.	.	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D
Query Conservation																																																												.	.	.	.
Alig confidence																										.	.	.	.									.	.	.	.	.																		.	.	.	.
Template Conservation																										.	.	.	.									.	.	.	.	.
Template Sequence		S	V	F	E	E	R	L	R	L	I	E	G	A	P	A	A	F	A	T	A	S	G	M	A	.	.	.	.	A	V	F	T	S	L	G	A	.	.	.	.	.	L	L	G	A	G	D	R	L	V	A	A	R	S	L	F	G	S	C	F	V	V	C	S	E	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D
Template Known Secondary structure													T		S						S	S				.	.	.	.								T	.	.	.	.	.	T			T	T							S	S											T					T	T								T	T
Template Predicted Secondary structure																										.	.	.	.									.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L
Query Conservation																															.
Alig confidence		.	.	.	.	.											.	.	.												.									.																						.	.
Template Conservation		.	.	.	.	.											.	.	.																					.																						.	.
Template Sequence		.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	.	.	.	V	P	T	Q	A	V	F	F	E	T	P	S	N	P	M	Q	S	L	V	D	.	I	A	A	V	T	E	L	A	H	A	A	G	A	K	V	V	L	D	N	V	F	.	.	A	T	P	L	L	Q	Q	G	F	P	L	G	V	D	V	V	V	Y
Template Known Secondary structure		.	.	.	.	.									T	T	.	.	.	S			S						S	S		T	T	T						.											T	T								T	T	.	.	T								G	G	G	T		S
Template Predicted Secondary structure		.	.	.	.	.											.	.	.																					.																						.	.
Template SS confidence
							147	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V
Query Conservation
Alig confidence							.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	T	H	I	.	.	.	.	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	E	Y	I	D	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A	W	V	L	L	K	G	L	E	T	L	A	I	R	V	Q	H
Template Known Secondary structure							.	.	.	.	S		S	S																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.																.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	P	S	V	R	W	V	R	Y	P	Y	L	P	S	H	P	Q	Y	D	L	A	K	R	Q	M	S	G	G	G	T	V	V	T	F	A	L	D	C	P	E	D	V	A	K	Q	R	A	F	E	V	L	D	K	M	R	L	I	D	I	S	N	N	L	G	D	A
Template Known Secondary structure															T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S		G	G	G													S	S	S				S			S		S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
						842	.	.	.	.	.	.	.	850	.													.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	F	H	A	P	T	M	S	F	P	V	.	.	.	.	.	.	.	.	.	.	.	.	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M
Query Conservation		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	L	V	T	H	P	A	T	T	T	H	R	A	M	G	P	E	G	R	A	A	I	G	L	G	D	G	V	V	R	I	S	V	G	L	E	D	T	D	D	L	I	A	D	I	D	R	A	L
Template Known Secondary structure		S						G	G	G	T	T	T	S	T	T							T	T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions