Job Description P33195 Confidence 99.84% Date Thu Jan 5 11:51:15 GMT 2012 Rank 36 Aligned Residues 294 % Identity 19% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

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		547	.	.	550	.	.	.	.	.					.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		Q	M	I	A	Q	L	A	D	W	.	.	.	.	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	V	D	E	I	E	T	L	A	I	E	R	C	K	K	L	F	N	C	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N	Q	G	V	Y	A	A	L	I	.	.	.	.	.	.	.	.	N	P	G	D	K	I	L	G	X	D	L	K	X	.	.	.	.	.	.	.	.	.	.	.	Y	E	S	C	F	Y
Template Known Secondary structure																				T		S							S	S													S	.	.	.	.	.	.	.	.		T	T											.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	.	.	G	I	T	S	P	G	F	I	G	A	D
Query Conservation																																																																					.	.
Alig confidence																				.	.	.																				.																											.	.
Template Conservation																				.	.	.																				.
Template Sequence		G	V	E	L	D	G	R	I	D	Y	E	K	V	R	E	I	A	K	.	.	.	K	E	K	P	K	L	I	V	C	G	A	S	A	Y	A	R	V	I	D	.	F	A	K	F	R	E	I	A	D	E	I	G	A	Y	L	F	A	D	I	A	H	I	A	G	L	V	V	A	G	E	H	P	S	P	F	P	Y	A	H
Template Known Secondary structure					T	T	S	S												.	.	.					S							S	S			S				.												T								T	T	T						T	T	S	S				T	T	T		S
Template Predicted Secondary structure																				.	.	.																				.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K
Query Conservation
Alig confidence												.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	S	S	T	T	H	K	T	L	.	.	.	.	.	.	R	G	P	R	G	G	I	I	X	T	N	D	E	E	L	A	K	K	I	N	S	A	I	F	P	G	I	.	.	.	.	.	.	.	.	.	.	.	Q	G	G	P	L	X	H	V	I	A	A	K	A	V	G	F	K	F	N	L	S	D	E	W	K	V
Template Known Secondary structure							S	S	T	T	T	.	.	.	.	.	.		S		S							S													T	T	T	T	.	.	.	.	.	.	.	.	.	.	.		S	S																	T	S
Template Predicted Secondary structure												.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.												.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.		.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850								.	.
Predicted Secondary structure																				.																																																					.	.	.	.	.	.	.
Query SS confidence																				.																																																					.	.	.	.	.	.	.
Query Sequence		A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	.	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	.	.	.	.	.	.	V	A
Query Conservation																				.																																																					.	.	.	.	.	.	.
Alig confidence																				.							.	.	.														.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																											.	.	.														.	.	.	.
Template Sequence		Y	A	K	Q	V	R	T	N	A	Q	V	L	A	N	V	L	X	D	R	K	F	K	L	V	S	.	.	.	D	G	T	D	N	H	L	V	L	X	S	F	L	.	.	.	.	D	R	E	F	S	G	K	D	A	D	L	A	L	G	N	A	G	I	T	A	N	K	N	T	V	P	G	E	I	R	S	P	F	I	T
Template Known Secondary structure																				T	T				G	G	.	.	.	G	S		S	S	S							T	.	.	.	.	T	S	S	S												T	T									T	T			S		T	T	T
Template Predicted Secondary structure																											.	.	.														.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.					.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		853	.	.	.	.	.	.	860	.	.	.	.					.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		G	T	L	M	V	E	P	T	E	S	E	S	.	.	.	.	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V	K	A
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		S	G	L	R	L	G	T	P	A	L	T	A	R	G	F	K	E	K	E	X	E	I	V	S	N	Y	I	A	D	I	L	D	D	V	N	N	E	K	L
Template Known Secondary structure		S												T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions