Job Description P33195 Confidence 99.80% Date Thu Jan 5 11:51:15 GMT 2012 Rank 48 Aligned Residues 347 % Identity 13% Template c3lv2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin Resolution 2.18 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																																																																			.
Alig confidence																.	.	.	.												.	.										.	.	.																							.
Template Conservation																.	.	.	.												.	.										.	.	.
Template Sequence		D	A	M	S	S	W	W	T	A	I	H	G	H	G	.	.	.	.	H	P	A	L	D	Q	A	L	T	T	Q	.	.	L	R	V	M	N	H	V	M	F	.	.	.	G	G	L	T	H	E	P	A	A	R	L	A	K	L	L	V	D	I	T	P	A	G	L	D	T	V	F	F	S	D	S	G	S	V	S	V	E
Template Known Secondary structure			T	T					T		T	T		B	S	.	.	.	.												.	.					S				S	.	.	.	S	S																	S	S	T	T								S	S
Template Predicted Secondary structure																.	.	.	.												.	.										.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.																.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	.	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q
Query Conservation																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	K	M	A	L	Q	Y	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L	A	M	S	I	C	D	P	H	G	G	M	H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P	Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q
Template Known Secondary structure													T	T	T		T	T								T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	T		S	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.	.	660	.	.	.				.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.									700	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.										.	.	.																																					.	.	.	.	.	.	.	.
Query SS confidence															.	.										.	.	.																																					.	.	.	.	.	.	.	.
Query Sequence		A	G	D	N	L	S	C	I	M	V	T	Y	P	.	.	S	T	H	G	V	Y	E	E	T	.	.	.	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	.	.	.	.	.	.	.	.	D	V	S	H	L	N	L	H	K
Query Conservation															.	.										.	.	.																																					.	.	.	.	.	.	.	.
Alig confidence															.	.										.	.	.																					.	.	.	.													.	.	.	.	.	.	.	.				.	.	.	.	.	.
Template Conservation																																																	.	.	.	.																								.	.	.	.	.	.
Template Sequence		H	A	G	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I	C	R	R	Y	E	V	L	L	I	F	D	E	I	.	.	.	.	A	T	G	F	G	R	T	G	A	L	F	A	A	D	H	A	G	V	S	P	D	I	M	.	.	.	.	.	.
Template Known Secondary structure			G	G	G								S	S				T	T	T						T													T	T								T	.	.	.	.	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				S			.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		C	V	G	K	A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	A	.	.	.	.	.	.	.	.	.	.	G	A	A	L	M	R	G	P	T	F	M	A	N	P	L	A	C	A	V	S	V	A	S	V	E	L	L	L	G	Q	D	W	R	.	.	.	T	R	I	T	E	L
Template Known Secondary structure					G	G	G	G	T	T	S	S																		.	.	.	.	.	.	.	.	.	.	S					S			T	T	T	T																	T	S				.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.											.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.
		789	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L
Query Conservation
Alig confidence																																		.	.	.	.	.																					.	.	.	.
Template Conservation																																		.	.	.	.	.																					.	.	.	.
Template Sequence		A	A	G	L	T	A	G	L	D	T	A	R	A	L	P	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	D	.	.	.	.	.	R	P	V	D	L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	.	.	.	.	P	F	R	N	L	V	Y	A	M	P	P	Y	I	C	T	P	A	E	I
Template Known Secondary structure										G	G	G	G	G	S	T	T								S	S							S	.	.	.	.	.	S													T	T	T					.	.	.	.		B	T	T								T	T
Template Predicted Secondary structure																																		.	.	.	.	.																					.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		869	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	I	T	S	A	M	V	E	V	A	R	L	V	G	S	L	P
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions