Job Description P33195 Confidence 98.73% Date Thu Jan 5 11:51:15 GMT 2012 Rank 227 Aligned Residues 323 % Identity 12% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.						.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	.	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E
Query Conservation																																																.	.	.	.	.
Alig confidence																							.	.	.																							.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																							.	.	.																																																		.	.	.	.	.	.	.
Template Sequence		D	S	V	L	N	A	D	K	L	V	T	E	N	Y	K	E	K	P	Y	L	L	.	.	.	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	M	.	.	.	.	.	.	.
Template Known Secondary structure																						T	.	.	.	T	S	S															S	S		T	T	T	T	T	T																							T	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																																		.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.				.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.																								.	.	.
Query SS confidence																																						.	.																								.	.	.
Query Sequence		G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	.	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	.	.	.	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V
Query Conservation																																						.	.																								.	.	.
Alig confidence																																						.	.																								.	.	.
Template Conservation
Template Sequence		L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R	G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y	D	L	F	L	N	D	L	R	N	I	P	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I
Template Known Secondary structure		T	T								S	S											T	T	T											T	T	T	T														S		S	S								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.										.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	E	I	V	L	H	K	K	H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K	N	Q	E	E	K	K	I	V	F	.	.	.	.
Template Known Secondary structure																	S		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T	T									S	S									.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.							.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.									.	.
Predicted Secondary structure																																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	.	.	.	.	.	.	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	.	.	.	.	.	.	.	.	L	Y
Query Conservation																																						.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																														.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	N	L	C	F	I	V	R	K	F	Y	S	S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q	K	K	Y	N	L	N	Y	D	W	N	V	Y
Template Known Secondary structure		.	.	.	.	.	.	.									T	T	T	S	S																																																G	G	G	G	T					G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation
Alig confidence										.	.	.	.	.	.								.	.	.	.	.	.	.													.	.	.	.	.	.	.											.
Template Conservation										.	.	.	.	.	.								.	.	.	.	.	.	.													.	.	.	.	.	.	.											.
Template Sequence		K	K	Q	R	G	L	F	S	.	.	.	.	.	.	F	V	P	L	L	A	K	.	.	.	.	.	.	.	I	A	E	H	L	K	T	H	H	I	Y	I	.	.	.	.	.	.	.	I	N	N	G	R	I	N	V	S	G	.	I	T	K	N	N	V	D	Y	I	A	D	K	I	C	L	S	L	S	Q	I
Template Known Secondary structure		S	S			S	S			.	.	.	.	.	.			G	G	G	G	G	.	.	.	.	.	.	.	G	T	T	T	T	T	T	T	T				.	.	.	.	.	.	.		T	T	S				G	G	G	.			T	T
Template Predicted Secondary structure										.	.	.	.	.	.								.	.	.	.	.	.	.													.	.	.	.	.	.	.											.
Template SS confidence
		349	350	.	.	.	.	.	.							.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.								.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions