Job Description P33195 Confidence 99.29% Date Thu Jan 5 11:51:15 GMT 2012 Rank 186 Aligned Residues 318 % Identity 11% Template c3ihjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp Resolution 2.30 Å

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		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.					.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure																			.						.	.	.	.
Query SS confidence																			.						.	.	.	.
Query Sequence		A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	.	L	T	G	Y	D	.	.	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G
Query Conservation																			.						.	.	.	.
Alig confidence																			.						.	.	.	.																							.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		S	Q	G	V	N	C	I	R	E	D	V	A	A	Y	I	T	R	R	D	G	G	V	P	A	D	P	D	N	I	Y	L	T	T	G	A	S	D	G	I	S	T	I	L	K	I	L	V	S	G	.	.	.	.	.	G	G	K	S	R	T	G	V	M	I	P	I	P	Q	Y	P	L	Y	S	A	V	I	S	E	L	D
Template Known Secondary structure				S																T	T	T					G	G	G					S	S																.	.	.	.	.		G	G	G	S								S			T									T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		617	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.	.	.	640	.			.	.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure														.	.														.	.														.							.	.																									.	.	.	.	.
Query SS confidence														.	.														.	.														.							.	.																									.	.	.	.	.
Query Sequence		M	Q	V	V	V	V	A	C	D	K	N	G	.	.	N	I	D	L	T	D	L	R	A	K	A	E	Q	.	.	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	.	.	.
Query Conservation														.	.														.	.														.							.	.																									.	.	.	.	.
Alig confidence														.	.														.	.														.							.	.																									.	.	.	.	.
Template Conservation
Template Sequence		A	I	Q	V	N	Y	Y	L	D	E	E	N	C	W	A	L	N	V	N	E	L	R	R	A	V	Q	E	A	K	D	H	C	D	P	K	V	L	C	I	I	N	P	G	N	P	T	G	Q	V	Q	S	R	K	C	I	E	D	V	I	H	F	A	W	E	E	K	L	F	L	L	A	D	E	V	Y	Q	D	N	V	Y
Template Known Secondary structure										B	G	G	G	T	T	B														T	T	T	S									S	S		T	T	T																				T								T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
												685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	D	C	R	F	H	S	F	K	K	V	L	Y	E	M	G	P	E	Y	S	S	N	V	E	L	A	S	F	H	S	T	S	K	G	Y	M	.	.	.	G	E	C	G	Y	R	G	G	Y	M	E	V	I	N	L	H	P	E	I	K	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	L	V	K	L	L	S
Template Known Secondary structure			T	T													T						T	T									S	S	S	S	T	T	.	.	.			S	S	S									S							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.													.	.	.	.	.	370	.	.
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.											.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.						.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence		A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	.	.	.	.	.	.	.	.	.	.	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	.	.	.	.	.	H	E	C	I	L	D	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation
Template Sequence		V	R	L	C	P	P	V	S	G	Q	A	A	M	D	I	V	V	N	P	P	V	A	G	E	E	S	F	E	Q	F	S	R	E	K	E	S	V	L	G	N	L	A	K	K	A	K	L	T	E	D	L	F	N	Q	V	P	G	I	H	C	N	P	L	Q	G	A	M	Y	A	F	P	R	I	F	I	P	A	K	A	V
Template Known Secondary structure			S															T					T	T	S	T	T																												T	S	T	T								B	S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.		.	.	.	.	.	850	.	.				.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure																						.						.									.	.	.
Query SS confidence																						.						.									.	.	.
Query Sequence		R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	.	P	T	M	S	F	P	V	A	.	.	.	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E
Query Conservation																						.						.									.	.	.
Alig confidence																						.						.									.	.	.									.	.
Template Conservation																																																.	.
Template Sequence		E	A	A	Q	A	H	Q	M	A	P	D	M	F	Y	C	M	K	L	L	E	E	T	G	I	C	V	V	P	G	S	G	F	G	Q	R	E	G	T	Y	H	F	R	M	T	I	L	.	.	P	P	V	E	K	L	K	T	V	L	Q	K	V	K	D	F	H	I	N
Template Known Secondary structure							T	T	S																B					G	G	G	T				T	T			B							.	.	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions