Job Description P33195 Confidence 99.20% Date Thu Jan 5 11:51:15 GMT 2012 Rank 203 Aligned Residues 320 % Identity 16% Template c3if2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution Resolution 2.50 Å

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		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.					.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S
Query Conservation																														.	.	.	.
Alig confidence					.	.	.																							.	.	.	.														.
Template Conservation					.	.	.																																								.
Template Sequence		Y	S	N	.	.	.	P	Q	G	D	S	A	F	I	D	A	L	V	G	F	F	N	R	H	Y	D	W	N	L	T	S	E	N	I	A	L	T	N	G	S	Q	N	A	F	F	.	Y	L	F	N	L	F	G	G	A	F	V	N	E	K	S	V	D	K	S	I	L	L	P	L	T	P	E	Y	I	G	Y	S	D	V
Template Known Secondary structure					.	.	.	T	T																							G	G	G					S	S							.							S																S	S	S	S			G	G	G	T	T
Template Predicted Secondary structure					.	.	.																																								.
Template SS confidence
		78	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		612							.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.						630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																		.	.	.	.	.																										.							.	.
Query SS confidence			.	.	.	.	.	.																		.	.	.	.	.																										.							.	.
Query Sequence		A	.	.	.	.	.	.	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	.	.	.	.	.	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q
Query Conservation			.	.	.	.	.	.																		.	.	.	.	.																										.							.	.
Alig confidence			.	.	.	.	.	.																		.	.	.	.	.																										.							.	.
Template Conservation
Template Sequence		H	V	E	G	Q	H	F	A	A	V	L	P	H	I	D	E	V	T	H	D	G	E	E	G	F	F	K	Y	R	V	D	F	E	A	L	E	N	L	P	A	L	K	E	G	R	I	G	A	I	C	C	S	R	P	T	N	P	T	G	N	V	L	T	D	E	E	X	A	H	L	A	E	I	A	K	R	Y	D	I	P
Template Known Secondary structure			S	S	S																T	T																T						T	T									S	S		T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		678	.	680	.	.	.	.					.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	Y	L	D	G	A	N	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																									.					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	I	D	N	A	Y	G	X	P	F	P	N	I	I	Y	S	D	A	H	L	N	W	D	N	N	T	I	L	C	F	S	L	S	K	.	I	G	L	P	.	.	.	.	G	X	R	T	G	I	I	V	A	D	A	K	V	I	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	S	A	X	N	A	V	V
Template Known Secondary structure							T	T		T	T	T	T			B		S								T	T							S	G	G	.	G	T		G	.	.	.	.	G	G																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.													.	.	.	300	.	.	.
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.		.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800				.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																							.	.	.
Query SS confidence																											.																							.	.	.
Query Sequence		A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	.	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	.	.	.	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S
Query Conservation																											.																							.	.	.
Alig confidence																											.																							.	.	.													.	.							.	.	.	.
Template Conservation																																																																	.	.							.	.	.	.
Template Sequence		N	L	A	P	T	R	F	G	A	A	I	A	T	P	L	V	A	N	D	R	I	K	Q	L	S	D	N	E	I	K	P	F	Y	Q	K	Q	A	T	L	A	V	K	L	L	K	Q	A	L	G	D	Y	P	L	X	I	H	K	P	E	G	A	I	F	.	.	L	W	L	W	F	K	.	.	.	.	D	L	P	I	S
Template Known Secondary structure		T	S	S															T	S									T																				S	S	S	S	S								B	S	S		.	.						T	.	.	.	.	T		S	S
Template Predicted Secondary structure																																																																	.	.							.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.					.	.	.	.	.
		830	.	.	.	.	.	.	.	.	.	840	.	.	.	.		.	.	.	.	.											850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure																	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	.	P	T	M	S	F	.	.	.	.	.	.	.	.	.	.	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation																	.						.	.	.	.	.	.	.	.	.	.
Alig confidence																	.						.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																													.	.
Template Sequence		T	L	D	L	Y	E	R	L	K	A	K	G	T	L	I	V	P	S	E	Y	F	F	P	G	V	D	V	S	D	Y	Q	H	A	H	E	C	I	R	X	S	I	A	A	.	.	D	E	Q	T	L	I	D	G	I	K	V	I	G	E	V	V	R	E	L	Y	D
Template Known Secondary structure												T	T						G	G	G	S		T	T	S			T	T		G	G	G	G	S						S		S	.	.
Template Predicted Secondary structure																																													.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions