Job Description P33195 Confidence 99.80% Date Thu Jan 5 11:51:15 GMT 2012 Rank 49 Aligned Residues 344 % Identity 13% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																																																																			.
Alig confidence																.	.	.	.												.	.										.	.	.																							.
Template Conservation																.	.	.	.												.	.										.	.	.
Template Sequence		D	G	S	S	G	A	L	V	A	N	I	G	H	G	.	.	.	.	R	A	E	V	G	E	R	M	A	A	Q	.	.	A	A	R	L	P	F	V	H	G	.	.	.	S	Q	F	S	S	D	V	L	E	E	Y	A	G	R	L	A	R	F	V	G	L	P	T	F	R	F	W	A	V	S	G	G	S	E	A	T	E
Template Known Secondary structure			T	T					T		T	T		B		.	.	.	.												.	.									T	.	.	.	T	T																	T	T		T	T							S	S
Template Predicted Secondary structure																.	.	.	.												.	.										.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.		.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure																																																		.																														.	.
Query SS confidence																																																		.																														.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	.	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	.
Query Conservation																																																		.																														.	.
Alig confidence																																																		.																														.	.
Template Conservation
Template Sequence		S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R	V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	P	K	L	P	K	P	D	P	A	R	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A	A	F	M	A	E	P	V	V
Template Known Secondary structure														T	T		T	T								T	T			T	T	T	G	G	G	G	S	G	G	G									T	T	S							T											G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
				655	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.				.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure		.	.							.	.																																																	.	.	.
Query SS confidence		.	.							.	.																																																	.	.	.
Query Sequence		.	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	.	.	.	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K
Query Conservation		.	.							.	.																																																	.	.	.
Alig confidence		.	.							.	.																									.	.	.	.																					.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A	G	I	I	F	I	A	D	E	V	M	.	.	.	.	S	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G	L	L	A	A
Template Known Secondary structure			G	G	G	T	T					T	T													T								T	T	.	.	.	.	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S						G	G	G	T	T	T	S	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	V	Y	E	T	V	M	G	.	.	.	.	.	.	.	.	.	.	.	G	F	M	H	G	F	T	Y	A	G	H	P	V	S	V	A	A	G	L	S	V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	P	Q	M	M	Q	V	R	G
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.							T	T	T	T																		T	T																								T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.												.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		808	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation
Alig confidence						.	.	.							.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation						.	.	.							.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		T	G	L	L	.	.	.	L	G	V	V	L	G	.	.	.	.	.	.	D	L	I	A	S	R	I	G	A	A	A	L	K	R	G	L	I	T	Y	.	.	.	.	.	.	.	D	H	L	L	L	G	P	P	L	S	I	T	A	A	E	V	D	G	L	L	A	L	L	A	G	A	L	E	D	V
Template Known Secondary structure			T	T		.	.	.							.	.	.	.	.	.															T	B				.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure						.	.	.							.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.				.	.	.	.	.	.							.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.								.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions