Job Description P33195 Confidence 100.00% Date Thu Jan 5 11:51:15 GMT 2012 Rank 8 Aligned Residues 381 % Identity 14% Template c3hbxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamate decarboxylase 1; PDBTitle: crystal structure of gad1 from arabidopsis thaliana Resolution 2.67 Å

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		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	T	E	M	M	R	Y	M	H	S	L	E	R	K	D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D
Query Conservation
Alig confidence																		.	.																									.	.	.											.
Template Conservation																		.	.																									.	.	.											.
Template Sequence		P	K	E	A	A	Y	Q	I	I	N	D	E	L	M	L	D	.	.	G	N	P	R	L	N	L	A	S	F	V	T	T	W	M	E	P	E	C	D	K	L	I	M	.	.	.	S	S	I	N	K	N	Y	V	D	M	.	D	E	Y	P	V	T	T	E	L	Q	N	R	C	V	N	M	I	A	H	L	F	N	A	P
Template Known Secondary structure														G	G	G	S	.	.			G	G	G	B	T	T			S														.	.	.		T	T	T		B	T	T		T	.	T	T																			T	T
Template Predicted Secondary structure																		.	.																									.	.	.											.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		564	.								.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590						.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630
Predicted Secondary structure				.	.	.	.	.	.	.																										.	.	.	.	.																																							.
Query SS confidence				.	.	.	.	.	.	.																										.	.	.	.	.																																							.
Query Sequence		A	V	.	.	.	.	.	.	.	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	.	.	.	.	.	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	N	I
Query Conservation				.	.	.	.	.	.	.																										.	.	.	.	.																																							.
Alig confidence				.	.	.	.	.	.	.					.																					.	.	.	.	.																																							.
Template Conservation															.
Template Sequence		L	E	E	A	E	T	A	V	G	V	G	T	V	.	G	S	S	E	A	I	M	L	A	G	L	A	F	K	R	K	W	Q	N	K	R	K	A	E	G	K	P	V	D	K	P	N	I	V	T	G	A	N	V	Q	V	C	W	E	K	F	A	R	Y	F	E	V	E	L	K	E	V	K	L	S	E	G	Y	Y	V	M
Template Known Secondary structure				T	T									S	.	S																							T	T				S								T	T												T	T									B	T	T	B		S
Template Predicted Secondary structure															.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.							.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.							.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	.	.	.	.	.	.	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	.	.	.	.	.	.	G	F	I	G
Query Conservation																																															.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence												.	.	.																																	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		D	P	Q	Q	A	V	D	M	V	D	.	.	.	E	N	T	I	C	V	A	A	I	L	G	S	T	L	N	G	E	F	E	D	V	K	L	L	N	D	L	L	V	E	K	N	K	E	T	G	W	D	T	P	I	H	V	D	A	A	S	G	G	F	I	A	P	F	L	Y	P	E	L	E	W	D	F	R	L	P	L
Template Known Secondary structure												.	.	.	T	T								B	S		T	T	T			B																												T	T	G	G	G	T						S	S				S	T	T	S	T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L
Query Conservation
Alig confidence														.	.	.	.	.	.														.	.
Template Conservation														.	.	.	.	.	.														.	.
Template Sequence		V	K	S	I	N	V	S	G	H	Y	G	L	.	.	.	.	.	.	V	Y	A	G	I	G	W	V	I	W	R	N	K	.	.	E	D	L	P	E	E	L	I	F	H	I	N	Y	L	G	A	D	Q	P	T	F	T	L	N	F	S	K	G	S	S	Q	V	I	A	Q	Y	Y	Q	L	I	R	L	G	H	E	G	Y
Template Known Secondary structure														.	.	.	.	.	.			S	S							S	S	G	.	.	G	G	S		G	G	G						S	S	S	S							S			S		B	S
Template Predicted Secondary structure														.	.	.	.	.	.														.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		779	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	.	.	.	V	A	G	T
Query Conservation																																																																										.	.	.	.
Alig confidence																																				.	.	.						.																														.	.	.	.
Template Conservation																																				.	.	.						.
Template Sequence		R	N	V	M	E	N	C	R	E	N	M	I	V	L	R	E	G	L	E	K	T	E	R	F	N	I	V	S	K	D	E	G	V	P	.	.	.	L	V	A	F	S	.	L	K	D	S	S	C	H	T	E	F	E	I	S	D	M	L	R	R	Y	G	W	I	V	P	A	Y	T	M	P	P	N	A	Q	H	I	T	V
Template Known Secondary structure																					T	T	T						S		S	S	S	S	S	.	.	.						.		S	S		S	S												T	T	T		B								T	T		T	T
Template Predicted Secondary structure																																				.	.	.						.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.				.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		855	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	V	I	R	E	D	F	S	R	T	L	A	E	R	L	V	I	D	I	E	K	V	M	R	E	L	D	E	L	P
Template Known Secondary structure								T	T																						T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.