Job Description P33195 Confidence 99.64% Date Thu Jan 5 11:51:15 GMT 2012 Rank 89 Aligned Residues 297 % Identity 14% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	.	G	N
Query Conservation																																																																															.
Alig confidence																	.																				.	.	.	.	.	.	.																																				.
Template Conservation																	.																				.	.	.	.	.	.	.
Template Sequence		K	F	E	Q	E	F	A	D	Y	C	N	V	N	Y	C	.	I	G	C	G	N	G	L	D	A	L	H	L	I	L	K	G	Y	D	I	.	.	.	.	.	.	.	G	F	G	D	E	V	I	V	P	S	N	T	F	I	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V	E	P	D	I	R	T	Y	N
Template Known Secondary structure											T	T	S	S			.				S													T	T		.	.	.	.	.	.	.		T	T							T	T	S											T	T										T	T	T	T
Template Predicted Secondary structure																	.																				.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	.	.	L	H
Query Conservation																																																																														.	.
Alig confidence													.	.	.												.	.							.																																											.	.
Template Conservation													.	.	.												.	.							.
Template Sequence		I	D	P	S	L	I	E	S	A	I	T	.	.	.	E	K	T	K	A	I	I	A	V	H	L	.	.	Y	G	Q	P	A	D	.	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q	A	H	G	S	L	Y	K	G	M	K	V	G	S	L	G	D	A	A	G	F	S	F	Y	P	A
Template Known Secondary structure				G	G	G	T	G	G	G			.	.	.	T	T									G	.	.	G	G	S				.											T	T								T	T		T	T				T	T			T	T	S	S	S	S								T	T
Template Predicted Secondary structure													.	.	.												.	.							.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L
Query Conservation
Alig confidence												.	.	.	.																																									.	.	.	.	.	.
Template Conservation												.	.	.	.																																									.	.	.	.	.	.
Template Sequence		K	N	L	G	S	L	G	D	G	G	.	.	.	.	A	V	V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	.	.	.	.	.	.	A	G	F	L	R	V	K	L	K	Y	L	D	K	W	N	E	E	R	R	K
Template Known Secondary structure		S	T	T			S	S				.	.	.	.					S													B	T	T		S	B	T	T	B			S				B								.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.																																									.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850		.	.	.	.
Predicted Secondary structure																																																																	.					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	V	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																									.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		I	A	Q	K	Y	I	A	G	I	N	N	P	N	V	I	I	P	V	E	A	D	Y	A	K	H	V	W	Y	T	F	V	I	R	.	.	.	.	.	.	S	E	K	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L	I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N
Template Known Secondary structure												B	T	T	B	B						T	T						S						.	.	.	.	.	.		T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
													855	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	W	Y	G	M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions