Job Description P33195 Confidence 99.49% Date Thu Jan 5 11:51:15 GMT 2012 Rank 135 Aligned Residues 320 % Identity 14% Template c3fcrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution Resolution 1.80 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure																			.																																										.													.	.	.	.	.	.	.	.
Query SS confidence																			.																																										.													.	.	.	.	.	.	.	.
Query Sequence		Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	.	H	G	T	N	P	A	S	A	H	M	A	G	.	.	.	.	.	.	.	.
Query Conservation																			.																																										.													.	.	.	.	.	.	.	.
Alig confidence																			.																																										.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	S	I	T	L	A	K	X	I	L	D	R	A	P	K	N	X	S	K	V	Y	F	G	L	G	G	S	D	A	N	E	T	N	V	K	L	I	W	Y	Y	N	N	I	L	G	R	P	E	K	K	K	I	I	S	R	W	R	G	Y	H	G	S	G	L	V	T	G	S	L	T	G	L	E	L	F	H	K	K	F
Template Known Secondary structure															S		T	T								S	S																			T	T		T	T								T	T					S	S							S			G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
						617	.	.	620	.	.	.	.	.	.	.	.	.	630	.														.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.			.	.	660	.	.	.				.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.							.	.	.
Query SS confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.							.	.	.
Query Sequence		.	.	.	.	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	.	.	G	V	Y	E	E	T	.	.	.	I	R	E	V	C	E	V	V	H	Q	F
Query Conservation		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.							.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.							.	.	.
Template Conservation
Template Sequence		D	L	P	V	E	Q	V	I	H	T	E	A	P	Y	Y	F	R	R	E	D	L	N	Q	T	E	E	Q	F	V	A	H	C	V	A	E	L	E	A	L	I	E	R	E	G	A	D	T	I	A	A	F	I	G	E	P	I	L	G	T	G	G	I	V	P	P	P	A	G	Y	W	E	A	I	Q	T	V	L	N	K	H
Template Known Secondary structure		T		S		T	T							S		G	G	G		S		T	T																							G	G	G								S	S	B	S	T	T	T		B				T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.									700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	.	.	.	.	.	.	.	.	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.												.	.	.	.	.	.	.	.				.	.	.	.	.	.																													.	.	.	.	.
Template Conservation												.	.	.	.																							.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		D	I	L	L	V	A	D	E	V	V	.	.	.	.	T	G	F	G	R	L	G	T	X	F	G	S	D	H	Y	G	L	E	P	D	I	I	.	.	.	.	.	.	T	I	A	K	G	L	T	S	A	Y	A	P	L	S	G	S	I	V	S	D	K	V	W	K	V	L	E	Q	.	.	.	.	.	G	T	D	E	N
Template Known Secondary structure		T								T	T	.	.	.	.	T	S	S	S	T	T	S	S	S							T				S			.	.	.	.	.	.				G	G	G	T	T	T	S	S																		.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.																							.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.							.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.
		747	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.		.	.	.	.	.			.	820	.	.	.
Predicted Secondary structure																																																																					.						.	.
Query SS confidence																																																																					.						.	.
Query Sequence		T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	.	E	C	I	L	D	.	.	I	R	P	L	K
Query Conservation																																																																					.						.	.
Alig confidence																																																																					.						.	.
Template Conservation
Template Sequence		G	P	I	G	H	G	W	T	Y	S	A	H	P	I	G	A	A	A	G	V	A	N	L	K	L	L	D	E	L	N	L	V	S	N	A	G	E	V	G	A	Y	L	N	A	T	X	A	E	A	L	S	Q	H	A	N	V	G	D	V	R	G	E	G	L	L	C	A	V	E	F	V	K	D	R	D	S	R	T	F	F
Template Known Secondary structure			S		S				T	T	T	T																		T	T																					T	T	S	T	T							S	S	S								S	B	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		D	A	A	D	K	I	G	P	Q	I	S	A	K	L	L	E	Q	D	K	.	I	I	A	R	A	X	P	Q	G	D	I	L	G	F	A	P	P	F	C	L	T	R	A	E	A	D	Q	V	V	E	G	T	L	R	A	V	K	A	V
Template Known Secondary structure			G	G	G																.							S	S	S	S								T	T
Template Predicted Secondary structure																					.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions