Job Description P33195 Confidence 100.00% Date Thu Jan 5 11:51:15 GMT 2012 Rank 9 Aligned Residues 367 % Identity 18% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	T	E	M	M	R	Y	M	H	S	L	E	R	K	D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D
Query Conservation
Alig confidence																								.																			.	.	.												.
Template Conservation																								.																			.	.	.												.
Template Sequence		S	E	K	E	I	L	E	E	L	K	K	Y	R	S	L	D	L	K	Y	E	D	G	.	N	I	F	G	S	X	C	S	N	V	L	P	I	T	R	K	I	V	.	.	.	D	I	F	L	E	T	N	L	G	D	P	.	G	L	F	K	G	T	K	L	L	E	E	K	A	V	A	L	L	G	S	L	L	N	N	K
Template Known Secondary structure															T	T	S			G	G	G	S	.		B		S		S						T							.	.	.				T	T			T	T	S	G	.	G	G																			T	T		T
Template Predicted Secondary structure																								.																			.	.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590						.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.
Query SS confidence		.																												.	.	.	.	.
Query Sequence		.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	.	.	.	.	.	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A
Query Conservation		.																												.	.	.	.	.
Alig confidence		.																												.	.	.	.	.
Template Conservation
Template Sequence		D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L	R	C	I	K	N	I	W	R	E	K	R	R	K	G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	F	S	F	E	K	G	R	E	X	X	D	L	E	Y	I	Y	A	P	I	K	E	D	Y	T	I	D	E	K	F	V	K	D
Template Known Secondary structure		T							S																							T	T					S	S							T	T			T										T								B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.													.	.	.	700	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	D	V	S	H	L	N
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		A	V	E	D	.	.	Y	D	V	D	G	I	I	G	I	A	G	T	T	E	L	G	T	I	D	N	I	E	E	L	S	K	I	A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V	N	Y	K	F	D	F	S	L	G	V	D	S	I	T	I	D
Template Known Secondary structure						.	.	S									B	S		T	T	T			B														T								T	T	G	G	G	T	G	G	G			G	G	G			T	T						S	G	G	G	T		S
Template Predicted Secondary structure						.	.
Template SS confidence
		165	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A
Query Conservation
Alig confidence							.	.	.	.	.																																	.	.	.	.
Template Conservation							.	.	.	.	.																																	.	.	.	.
Template Sequence		P	H	K	X	G	.	.	.	.	.	H	C	P	I	P	S	G	G	I	L	F	K	D	I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L	T	E	T	R	Q	.	.	.	.	A	T	I	L	G	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E	G	Q	R	K	I	V	N	E	C
Template Known Secondary structure		T	T	T	T	T	.	.	.	.	.				S	S							S	S	G	G	G	G	G	G	T					T	T	S	S	S	S			.	.	.	.		S	S		S	S			S
Template Predicted Secondary structure							.	.	.	.	.																																	.	.	.	.
Template SS confidence
		243	.	.	.	.						.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K
Query Conservation
Alig confidence																								.	.	.									.	.	.	.	.	.	.	.																									.	.
Template Conservation																								.	.	.									.	.	.	.	.	.	.	.																									.	.
Template Sequence		X	E	N	T	L	Y	L	Y	K	K	L	K	E	N	N	F	K	P	V	I	E	P	.	.	.	I	L	N	I	V	A	I	E	.	.	.	.	.	.	.	.	D	E	D	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S	V	C	N	C	V	.	.	K	A	L	R	I	V	V	X	P	H	I	K	R
Template Known Secondary structure															T	T			B	S	S			.	.	.	S	S	S						.	.	.	.	.	.	.	.		T	T											T	T		B					S	S	S	.	.	S								T	T
Template Predicted Secondary structure																								.	.	.									.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.									.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380
		866	.	.	.	870	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	D	R	F	I	D	A	M	L	A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	I	D	N	F	I	E	I	L	N	S	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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