Job Description P33195 Confidence 99.24% Date Thu Jan 5 11:51:15 GMT 2012 Rank 198 Aligned Residues 313 % Identity 15% Template c3eleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.					.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G
Query Conservation																																			.	.	.	.
Alig confidence										.	.	.																							.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																														.	.	.	.	.	.	.	.
Template Sequence		V	A	L	H	G	Y	T	S	.	.	.	A	Q	G	D	V	E	T	R	A	A	I	A	E	F	L	N	N	T	H	G	T	H	F	N	A	D	N	L	Y	X	T	X	G	A	A	A	S	L	S	I	C	F	R	A	L	.	.	.	.	.	.	.	.	T	S	D	A	Y	D	E	F	I	T	I	A	P	Y	F	P
Template Known Secondary structure						S				.	.	.	T	T																							G	G	G					S	S													.	.	.	.	.	.	.	.			S	T	T							S	S			T
Template Predicted Secondary structure										.	.	.																																														.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.		.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.							.
Predicted Secondary structure																								.																														.				.	.																.	.	.	.	.	.
Query SS confidence																								.																														.				.	.																.	.	.	.	.	.
Query Sequence		T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	.	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	.	.	.	.	.	.	G
Query Conservation																								.																														.				.	.																.	.	.	.	.	.
Alig confidence																								.													.	.	.															.				.	.																.	.	.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		E	Y	K	V	F	V	N	A	A	G	A	R	L	V	E	V	P	A	D	T	E	H	F	Q	I	D	F	D	A	L	E	E	R	I	N	.	.	.	A	H	T	R	G	V	I	I	N	S	P	N	N	P	S	G	T	V	Y	S	E	E	T	I	K	K	L	S	D	L	L	E	K	K	S	K	E	I	G	R	P	I
Template Known Secondary structure		T								T	T										T	T	T	S	S									T			.	.	.	T	T								S	S		T	T	T																								T	S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		677	.	.	680	.	.	.	.	.	.					.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		Q	V	Y	L	D	G	A	N	M	N	.	.	.	.	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																												.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	I	A	D	E	P	Y	R	E	I	V	Y	D	G	I	K	V	P	F	V	T	K	Y	Y	D	N	T	L	V	C	Y	S	Y	S	K	S	L	S	L	P	.	.	.	.	G	E	R	I	G	Y	V	L	V	P	D	E	V	Y	D	K	A	.	.	.	.	.	.	.	.	.	.	.	.	E	L	Y	A	A	V
Template Known Secondary structure								T	T	T	T		B		T	T						G	G	G	T		S	S							S	T	T	T	S	S		G	.	.	.	.	G	G									T	T	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.													270	.	.	.	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D
Query Conservation
Alig confidence																																																	.																			.	.	.	.	.	.	.	.
Template Conservation																																																	.																			.	.	.	.	.	.	.	.
Template Sequence		C	G	A	G	R	A	L	G	Y	V	C	A	P	S	L	F	Q	K	X	I	V	K	C	Q	G	A	T	G	D	I	N	A	Y	K	E	N	R	D	L	L	Y	E	G	L	T	R	I	.	G	Y	H	C	F	K	P	D	G	A	F	Y	X	F	V	K	A	L	.	.	.	.	.	.	.	.	E	D	D	S	N	A
Template Known Secondary structure								T	T				S									T	T		T	T																							.	T							S	B	S	S							S	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																	.																			.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340									.	.	.	.	.	.
		833	.	.	.	.	.	.	840	.	.	.	.		.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	A	K	R	L	I	D	Y	G	F	H	A	.	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation														.
Alig confidence														.																	.	.
Template Conservation																															.	.
Template Sequence		F	C	E	K	A	K	E	E	D	V	L	I	V	A	A	D	G	F	G	C	P	G	W	V	R	I	S	Y	C	.	.	V	D	R	E	X	I	K	H	S	X	P	A	F	E	K	I	Y	K	K	Y	N	K
Template Known Secondary structure									T	T						G	G	G	G	T		T	T								.	.	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions