Job Description P33195 Confidence 98.76% Date Thu Jan 5 11:51:15 GMT 2012 Rank 226 Aligned Residues 304 % Identity 14% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.								.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	.	.	.	.	.	.	.	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P
Template Known Secondary structure												T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S												T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.				.	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.														.	.	.
Predicted Secondary structure																																	.	.	.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	.	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	M
Query Conservation																																	.	.	.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.												.	.	.												.	.	.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.												.	.	.
Template Sequence		X	T	D	E	G	.	P	D	X	G	V	V	R	E	L	V	K	.	.	.	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H
Template Known Secondary structure				T	T		.										T	T	.	.	.	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S
Template Predicted Secondary structure							.												.	.	.
Template SS confidence
		157	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I
Query Conservation
Alig confidence																			.											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	.	X	S	S	T	S	K	I	T	H	A	.	.	.	.	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H
Template Known Secondary structure											T		T	T					.				S	T	T	T	S		T	.	.	.	.	T	S	S																.	.	.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																			.											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.													.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		766	.	.	.						770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		S	W	M	Y	.	.	.	.	.	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	.	.	.	.	.	.	.	.	T	A	S	R	V	V	E	L	A	K	E	A
Template Known Secondary structure							S																															G	G	G		S							S	B	S	S							S	T	T	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.									.	.	.	.	360	.	.	.	.	.	.	.
		841	.	.	.		.		.	.	.	.						850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure						.		.					.	.	.	.	.
Query SS confidence						.		.					.	.	.	.	.
Query Sequence		G	F	H	A	.	P	.	T	M	S	F	.	.	.	.	.	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation						.		.					.	.	.	.	.
Alig confidence						.		.					.	.	.	.	.														.
Template Conservation																															.
Template Sequence		G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P	.	P	V	A	E	L	E	V	A	X	D	G	F	A	T	C	V	L	X	A	A	L
Template Known Secondary structure		T						T	T	T	T	S	G	G	G			T	T	S								S	S	S	.
Template Predicted Secondary structure																															.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions