Job Description P33195 Confidence 99.64% Date Thu Jan 5 11:51:15 GMT 2012 Rank 88 Aligned Residues 342 % Identity 18% Template c3bs8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis Resolution 2.30 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A
Query Conservation
Alig confidence																.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		D	Y	V	L	S	W	G	P	L	I	L	G	H	T	.	.	.	.	N	D	R	V	V	E	S	L	K	K	V	A	E	Y	G	T	S	F	G	A	P	T	.	.	.	.	.	.	.	.	E	V	E	N	E	L	A	K	L	V	I	D	R	V	P	S	V	E	I	V	R	M	V	S	S	G	T	E	A	T	M	S
Template Known Secondary structure			S	S	G	G	G	T	T		T	T		B	S	.	.	.	.																S			S	S			.	.	.	.	.	.	.	.														S	T	T		S						S
Template Predicted Secondary structure																.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.																				.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation											.	.	.	.	.																																																					.	.	.	.	.
Template Sequence		A	L	R	L	A	R	G	Y	T	.	.	.	.	.	G	R	N	K	I	L	K	F	E	G	C	Y	H	G	H	G	D	S	L	L	I	K	A	G	S	G	V	A	T	L	G	L	P	D	S	P	G	V	P	E	G	I	A	K	N	T	I	T	V	P	Y	N	.	.	.	.	.	D	L	E	S	V	K	L	A	F
Template Known Secondary structure											.	.	.	.	.	T									T					S		G	G	G						S	S	S	S		B				S	S	T	T			T	T	S	S	T	T						T	T	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																																																					.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.	.				.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.				.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure																.											.	.	.																																			.	.	.
Query SS confidence																.											.	.	.																																			.	.	.
Query Sequence		E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	.	P	S	T	H	G	V	Y	E	E	T	.	.	.	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	.	.	.	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I
Query Conservation																.											.	.	.																																			.	.	.
Alig confidence																.											.	.	.																																			.	.	.													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	Q	F	G	E	D	I	A	G	V	I	V	E	P	V	A	G	N	M	G	V	V	P	P	Q	E	G	F	L	Q	G	L	R	D	I	T	E	Q	Y	G	S	L	L	I	F	D	E	V	M	T	G	F	R	V	D	Y	N	C	A	Q	G	Y	F	G	V	T	P	D	L	T	C	L	G	K	V	I	G	.	.	.
Template Known Secondary structure					G	G	G								S	S	B		S	S	S		B				T	T													T								T	T	T	T	T	T	T	S	T	T						T	T				S						G	G	G	G	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I
Query Conservation
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	G	L	P	V	G	A	Y	G	G	K	A	E	I	M	E	Q	I	.	.	.	.	.	.	.	.	.	.	A	P	S	G	P	I	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	L	E	T	L	K	Q	L	T	P	D	S	Y	K	N	F	I	K	K	G	D	R	L	E	E	G	I
Template Known Secondary structure		.	.	.	.	T	T	S	S												T	T	B	.	.	.	.	.	.	.	.	.	.	T	T	T	S	S	B					S	S	T	T														T
Template Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
						272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.											290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810						.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	.	.	.	.	.	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																																				.	.	.	.			.
Template Conservation																																																												.	.	.	.			.
Template Sequence		S	K	A	A	E	A	H	G	I	P	H	T	F	N	R	A	G	S	M	I	G	F	F	F	T	N	E	P	V	I	N	Y	E	T	A	K	A	S	D	L	K	L	F	A	S	Y	Y	K	G	M	A	N	E	G	V	F	L	P	.	.	.	.	P	S	.	Q	F	E	G	L	F	L	S	T	A	H	T	D	E	D
Template Known Secondary structure								T	T									T	T						S	S	S	S				S					T	T	S															T	T					.	.	.	.	S	S	.	S	S	S		B				T	T
Template Predicted Secondary structure																																																												.	.	.	.			.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		868	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	N	T	I	Q	A	A	E	K	V	F	A	E	I	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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