Job Description P33195 Confidence 99.09% Date Thu Jan 5 11:51:15 GMT 2012 Rank 212 Aligned Residues 306 % Identity 13% Template c3asaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: crystal structure of apo-ll-diaminopimelate aminotransferase from2 chlamydia trachomatis Resolution 2.05 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S
Query Conservation
Alig confidence									.	.	.																			.																									.	.	.	.	.	.	.	.
Template Conservation									.	.	.																			.																									.	.	.	.	.	.	.	.
Template Sequence		T	C	R	G	Y	G	P	.	.	.	D	F	G	L	P	A	L	R	Q	K	L	S	E	D	F	Y	R	G	.	F	V	D	A	K	E	I	F	I	S	D	G	A	K	V	D	L	F	R	L	L	S	F	F	.	.	.	.	.	.	.	.	G	P	N	Q	T	V	A	I	Q	D	P	S	Y	P	A	Y	L	D	I
Template Known Secondary structure									.	.	.	T	T												T	T	S	T	T	.	S	S		G	G	G					S														.	.	.	.	.	.	.	.		S	S								S
Template Predicted Secondary structure									.	.	.																			.																									.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.					.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																															.	.	.	.																												.	.	.	.
Query SS confidence																																															.	.	.	.																												.	.	.	.
Query Sequence		A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	.	.	.	.	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	.	.	.	.
Query Conservation																																															.	.	.	.																												.	.	.	.
Alig confidence																												.	.	.	.	.															.	.	.	.							.																					.	.	.	.
Template Conservation																												.	.	.	.	.																									.
Template Sequence		A	R	L	T	G	A	K	E	I	I	A	L	P	C	L	Q	E	N	A	F	F	P	E	F	P	E	.	.	.	.	.	D	T	H	I	D	I	L	C	L	C	S	P	N	N	P	T	G	T	V	L	N	K	D	Q	.	L	R	A	I	V	H	Y	A	I	E	H	E	I	L	I	L	F	D	A	A	Y	S	T	F
Template Known Secondary structure					T	T		S									G	G	G	T	T						T	.	.	.	.	.	T				S						S	S		T	T	T									.											T	T								T	T	G	G	G
Template Predicted Secondary structure																												.	.	.	.	.																									.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
					684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A
Query Conservation		.	.	.
Alig confidence		.	.	.																															.	.	.	.																				.	.	.	.	.	.	.													.
Template Conservation																																			.	.	.	.																				.	.	.	.	.	.	.													.
Template Sequence		I	S	D	P	S	L	P	K	S	I	F	E	I	P	D	A	R	F	C	A	I	E	I	N	S	F	S	K	P	L	G	F	A	.	.	.	.	G	I	R	L	G	W	T	V	I	P	Q	E	L	T	Y	A	D	G	H	.	.	.	.	.	.	.	F	V	I	Q	D	W	E	R	F	L	S	T	.	T	F	N	G
Template Known Secondary structure					T	T	S		S	S	G	G	G	S	T	T	G	G	G	T									G	G	G	T	T	T	.	.	.	.	T										T	T		B		T	T	S		.	.	.	.	.	.	.	B												.
Template Predicted Secondary structure																																			.	.	.	.																				.	.	.	.	.	.	.													.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.
Query Conservation																																																																																	.
Alig confidence																																									.													.	.							.	.	.	.																.
Template Conservation																																									.													.	.							.	.	.	.
Template Sequence		A	S	I	P	A	Q	E	A	G	V	A	G	L	S	I	L	P	Q	L	E	A	I	H	Y	Y	R	E	N	S	D	L	L	R	K	A	L	L	A	T	.	G	F	E	V	F	G	G	E	H	A	P	Y	.	.	L	W	V	K	P	T	.	.	.	.	Q	A	N	I	S	D	R	D	L	F	D	F	F	L	R	E
Template Known Secondary structure																	T	T	T																					T	.	T							S	S	S	S		.	.							.	.	.	.		T	T			T	T	T
Template Predicted Secondary structure																																									.													.	.							.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		840	.	.	.	.		.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
Predicted Secondary structure							.							.	.
Query SS confidence							.							.	.
Query Sequence		Y	G	F	H	A	.	P	T	M	S	F	P	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L
Query Conservation							.							.	.
Alig confidence							.							.	.											.	.
Template Conservation																										.	.
Template Sequence		Y	H	I	A	I	T	P	G	I	G	F	G	R	S	G	S	G	F	V	R	F	S	S	L	.	.	G	K	R	E	D	I	L	A	A	C	E	R	L	Q
Template Known Secondary structure			S						G	G	G	G		G	G	G	T	T								.	.	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions