Job Description P33195 Confidence 99.70% Date Thu Jan 5 11:51:15 GMT 2012 Rank 76 Aligned Residues 314 % Identity 17% Template c3a8uX_ PDB info PDB header:transferase Chain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase Resolution 1.40 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																													.															.	.	.	.	.
Query SS confidence																.	.																																													.															.	.	.	.	.
Query Sequence		Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	.	.	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	.	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	.	.	.	.	.
Query Conservation																.	.																																													.															.	.	.	.	.
Alig confidence																.	.																	.																												.															.	.	.	.	.
Template Conservation																																		.
Template Sequence		P	L	S	F	Q	L	A	E	K	I	T	D	L	T	P	G	N	L	N	H	V	F	F	T	D	S	G	S	E	C	A	L	.	T	A	V	K	M	V	R	A	Y	W	R	L	K	G	Q	A	T	K	T	K	M	I	G	R	A	R	G	Y	H	G	V	N	I	A	G	T	S	L	G	G	V	N	G	N	R	K	L
Template Known Secondary structure													T	T	S	S	T	T								S	S							.													T	T		T	T								T	T					S	S														T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
									619	620	.	.														.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.		.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.				.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.												.	.	.
Query SS confidence		.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.												.	.	.
Query Sequence		.	.	.	.	.	.	.	V	V	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	.	D	N	L	S	C	I	M	V	T	.	Y	P	S	T	H	G	V	Y	E	E	T	.	.	.	I	R	E	V	C	E	V	V	H	Q
Query Conservation		.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.												.	.	.
Alig confidence		.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.												.	.	.
Template Conservation
Template Sequence		F	G	Q	P	M	Q	D	V	D	H	L	P	H	T	L	L	A	S	N	A	Y	S	R	G	M	P	K	E	G	G	I	A	L	A	D	E	L	L	K	L	I	E	L	H	D	A	S	N	I	A	A	V	F	V	E	P	L	A	G	S	A	G	V	L	V	P	P	E	G	Y	L	K	R	N	R	E	I	C	N	Q
Template Known Secondary structure		T				S		S										G	G	G	T	T		S	S	S		S	S	S																	G	G	G								S	S	B	T	T	T	T		B				T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.									700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	.	.	.	.	.	.	.	.	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.													.	.	.	.	.	.	.	.				.	.	.	.	.	.																													.	.	.
Template Conservation												.	.	.	.																								.	.	.	.	.	.																													.	.	.
Template Sequence		H	N	I	L	L	V	F	D	E	V	.	.	.	.	I	T	G	F	G	R	T	G	S	M	F	G	A	D	S	F	G	V	T	P	D	L	M	.	.	.	.	.	.	C	I	A	K	Q	V	T	N	G	A	I	P	M	G	A	V	I	A	S	T	E	I	Y	Q	T	F	M	N	.	.	.	Q	P	T	P	E	Y
Template Known Secondary structure			T								T	.	.	.	.	T	T	T	T	T	T	T	S	S	S	S						T				S			.	.	.	.	.	.				G	G	G	G	T	T	S	S																	T	.	.	.		S	S		T	T
Template Predicted Secondary structure												.	.	.	.																								.	.	.	.	.	.																													.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.							.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.
		746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E
Query Conservation
Alig confidence												.																								.	.	.
Template Conservation												.																								.	.	.
Template Sequence		A	V	E	F	P	H	G	Y	T	Y	.	S	A	H	P	V	A	C	A	A	G	L	A	A	L	C	L	L	Q	K	E	N	L	V	.	.	.	Q	S	V	A	E	V	A	P	H	F	E	K	A	L	H	G	I	K	G	A	K	N	V	I	D	I	R	N	F	G	L	A	G	A	I	Q	I	A	P	R	D	G	D
Template Known Secondary structure		S		S	S					T	T	.	T	T																		T	T			.	.	.																T	T	T	T	S	T	T								T	T									B	T	T	B
Template Predicted Secondary structure												.																								.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		A	I	V	R	P	F	E	A	G	M	A	L	W	K	A	G	F	Y	V	R	.	.	.	.	F	G	G	D	T	L	Q	F	G	P	T	F	N	S	K	P	Q	D	L	D	R	L	F	D	A	V	G	E	V	L	N	K	L
Template Known Secondary structure		S	S														T					.	.	.	.			T	T								T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions