Job Description P33195 Confidence 99.37% Date Thu Jan 5 11:51:15 GMT 2012 Rank 168 Aligned Residues 376 % Identity 17% Template c2zc0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase Resolution 2.30 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.			510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530				.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																					.																								.	.																						.	.	.
Query SS confidence																					.																								.	.																						.	.	.
Query Sequence		L	R	D	D	E	I	L	T	H	P	V	F	N	R	Y	H	S	E	T	.	E	M	M	R	Y	M	H	S	L	E	R	K	D	L	A	L	N	Q	A	M	I	P	L	.	.	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	.	.	.	A	E	L	H	P	F	C	P	P	E	Q
Query Conservation																					.																								.	.																						.	.	.
Alig confidence																					.													.	.	.	.								.	.																						.	.	.									.	.	.
Template Conservation																																		.	.	.	.																																										.	.	.
Template Sequence		M	D	Y	T	K	Y	L	A	G	R	A	N	W	I	K	G	S	A	L	A	D	V	M	K	K	A	S	E	L	Q	K	K	.	.	.	.	G	V	K	L	I	S	L	A	A	G	D	P	D	P	E	L	I	P	R	A	V	L	G	E	I	A	K	E	V	L	E	K	E	P	K	S	V	M	Y	T	P	.	.	.
Template Known Secondary structure				G	G	G	G	S		G	G	G	G	G																	T	T	S	.	.	.	.	S						S							T	T	T	S																	G	G	G	G	S				.	.	.
Template Predicted Secondary structure																																		.	.	.	.																																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V
Query Conservation																								.	.
Alig confidence																								.	.																							.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		A	N	G	I	P	E	L	R	E	E	L	A	A	F	L	K	K	Y	D	H	L	E	V	S	P	E	N	I	V	I	T	I	G	G	T	G	A	L	D	L	L	G	R	V	L	I	.	.	.	.	.	.	.	D	P	G	D	V	V	I	T	E	N	P	S	Y	I	N	T	L	L	A	F	E	Q	L	G	A	K	I
Template Known Secondary structure		T	T																	S						G	G	G																				.	.	.	.	.	.	.		T	T								S											T	T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		620	.	.	.	.	.	.	.	.	.	630			.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.		.	.	.		.	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.							.	.	.	.
Predicted Secondary structure													.	.																						.				.							.	.																								.	.	.	.	.	.
Query SS confidence													.	.																						.				.							.	.																								.	.	.	.	.	.
Query Sequence		V	V	V	A	C	D	K	N	G	N	I	.	.	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	.	T	Y	P	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	.	.	.	.	.	.	N	M	N	A
Query Conservation													.	.																						.				.							.	.																								.	.	.	.	.	.
Alig confidence													.	.																						.				.							.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	V	P	V	D	N	D	G	M	R	V	D	L	L	E	E	K	I	K	E	L	K	A	K	G	Q	K	V	K	L	I	Y	T	I	P	T	G	Q	N	P	M	G	V	T	M	S	M	E	R	R	K	A	L	L	E	I	A	S	K	Y	D	L	L	I	I	E	D	T	A	Y	N	F	M	R	Y	E	G	G	D
Template Known Secondary structure								T	T																	T	T											S	S		T	T	T																				T								T	T	T	T		B	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W
Query Conservation
Alig confidence																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	P	L	K	A	L	D	N	E	G	R	V	I	V	A	G	T	L	S	K	V	L	G	T	G	.	.	.	.	F	R	I	G	W	I	I	A	E	G	E	I	L	K	K	V	L	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	P	I	D	F	C	A	P	A	I	S	Q	Y	I	A	L	E	Y
Template Known Secondary structure					G	G	G	G		S	S									S						S	S	.	.	.	.	S																			.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	S	S	S
Template Predicted Secondary structure																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.													.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800		.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.
Predicted Secondary structure																																			.																																								.						.
Query SS confidence																																			.																																								.						.
Query Sequence		M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	.	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	.
Query Conservation																																			.																																								.						.
Alig confidence																																			.																			.	.	.	.	.	.	.															.						.
Template Conservation																																																						.	.	.	.	.	.	.
Template Sequence		L	K	R	G	Y	F	E	K	Y	H	L	E	G	A	L	L	G	Y	K	E	K	R	D	I	M	L	K	A	L	E	N	H	L	P	N	A	E	F	T	K	P	I	A	G	M	F	V	M	F	F	L	P	.	.	.	.	.	.	.	E	G	A	D	G	I	S	F	A	N	E	L	M	E	R	E	G	V	V	V	V
Template Known Secondary structure				T	T						T	T	T	T																					S	S	S						S	B	S	S							S	.	.	.	.	.	.	.	T	T													T	T					B
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		845	.	.	.	.	850	.					.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		P	T	M	S	F	P	V	.	.	.	.	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.										.
Template Conservation																						.
Template Sequence		P	G	K	P	F	Y	T	D	E	S	G	K	N	A	I	R	L	N	F	S	.	R	P	S	K	E	E	I	P	I	G	I	K	K	L	A	K	L	Y	K	E
Template Known Secondary structure				G	G	G		S	S	S			T	T							S	.	S	S		T	T															T
Template Predicted Secondary structure																						.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.