Job Description P33195 Confidence 99.79% Date Thu Jan 5 11:51:15 GMT 2012 Rank 52 Aligned Residues 320 % Identity 14% Template c2z9wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610			.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																																																.	.
Query SS confidence																								.	.																																																.	.
Query Sequence		A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	.	.	S	A	H	M	A	G	M
Query Conservation																								.	.																																																.	.
Alig confidence																								.	.																				.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		D	P	A	F	Q	L	L	Y	E	K	V	V	D	K	A	Q	K	A	M	R	L	S	N	K	P	V	I	L	H	G	E	P	V	L	G	L	E	A	A	A	A	S	L	.	.	.	.	.	.	.	.	.	I	S	P	D	D	V	V	L	N	L	A	S	G	V	Y	G	K	G	F	G	Y	W	A	K	R	Y	S	P
Template Known Secondary structure		S																		T	T		S	S						S	S		T												.	.	.	.	.	.	.	.	.			T	T								S	S															S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80										.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I
Query Conservation
Alig confidence																																															.																							.
Template Conservation																																															.																							.
Template Sequence		H	L	L	E	I	E	V	P	Y	N	E	A	I	D	P	Q	A	V	A	D	M	L	K	A	H	P	E	I	T	V	V	S	V	C	H	H	D	T	P	S	G	T	I	N	P	.	I	D	A	I	G	A	L	V	S	A	H	G	A	Y	L	I	V	D	A	V	S	S	.	F	G	G	M	K	T	H	P	E	D	C
Template Known Secondary structure										T	T	S															T	T								S			G	G	G	T					.											T	T								T	T	T	.	B	T	T	B	S			G	G	G	T
Template Predicted Secondary structure																																															.																							.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.								.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	.	.	.	.	.	.	.	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		K	A	D	I	Y	V	T	G	P	N	K	C	L	.	.	.	.	.	G	A	P	P	G	L	T	M	M	G	V	S	E	R	A	W	A	K	M	K	A	N	P	L	A	P	R	A	S	M	L	S	I	V	D	W	E	N	A	W	S	R	D	K	P	F	P	F	T	P	S	V	S	E	I	N	G	L	D	V	A	L
Template Known Secondary structure		T		S						S	S	S	T	T	.	.	.	.	.				S																	T		T	T	S			S	S	T	T		S	G	G	G	T	T	T	T	S	T	T	S			S	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		771	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.		.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																								.
Query SS confidence																																																.																								.
Query Sequence		R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	.	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	P	T	M	S
Query Conservation																																																.																								.
Alig confidence																																																.					.	.	.	.	.															.
Template Conservation																																																					.	.	.	.	.
Template Sequence		D	L	Y	L	N	E	G	P	E	A	V	W	A	R	H	A	L	T	A	K	A	M	R	A	G	V	T	A	M	G	L	S	V	W	A	A	S	D	S	I	A	S	P	T	T	T	A	V	R	T	P	.	.	.	.	.	D	G	V	D	E	K	A	L	R	Q	A	A	R	A	R	Y	G	V	V	F	S	S	G	R
Template Known Secondary structure																															T			B	S	S	S	S	G	G	G	B		S	S								.	.	.	.	.	T	T																			B
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		849	850		.	.	.	.	.	.	.	.		.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure				.									.
Query SS confidence				.									.
Query Sequence		F	P	.	V	A	G	T	L	M	V	E	.	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation				.									.
Alig confidence				.									.
Template Conservation
Template Sequence		G	E	T	L	G	K	L	T	R	I	G	H	M	G	P	T	A	Q	P	I	Y	A	I	A	A	L	T	A	L	G	G	A	M	N	A	A
Template Known Secondary structure		G	G	G	T	T	T								G	G	G		S																		T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions