Job Description P33195 Confidence 98.69% Date Thu Jan 5 11:51:15 GMT 2012 Rank 229 Aligned Residues 313 % Identity 14% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.			.	560	.	.	.		.	.	.			.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																														.	.						.				.	.
Query SS confidence																														.	.						.				.	.
Query Sequence		A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	.	.	L	T	G	Y	D	.	A	V	C	.	.	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H
Query Conservation																														.	.						.				.	.
Alig confidence										.	.	.																		.	.						.				.	.																			.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		D	E	I	F	P	Y	A	P	.	.	.	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	.	.	.	.	.	.	.	.	N	Q	D	D	T	I	L	L	P	E	H	N	W
Template Known Secondary structure		G	G	T	S	S				.	.	.	T	T																		T	T			G	G	G	B							S															.	.	.	.	.	.	.	.		T	T							S	S
Template Predicted Secondary structure										.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.			.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.		.	.	.	660	.	.			.	.	.	.	.	.	.	670	.	.	.						.	.
Predicted Secondary structure																					.	.																																	.							.	.												.	.	.	.	.
Query SS confidence																					.	.																																	.							.	.												.	.	.	.	.
Query Sequence		G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	.	.	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	.	H	G	V	Y	E	E	.	.	T	I	R	E	V	C	E	V	V	H	Q	.	.	.	.	.	F	G
Query Conservation																					.	.																																	.							.	.												.	.	.	.	.
Alig confidence																					.	.																																	.							.	.												.	.	.	.	.
Template Conservation
Template Sequence		G	N	Y	K	L	V	F	N	T	R	N	G	A	N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K
Template Known Secondary structure		T							T	T	T	T										B		T	T	S		B		S												S	S								S	S		T	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		676	.	.	.	680	.	.	.	.												.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.								.	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Query Sequence		G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	.	.	.	.	.	.	.	K	A	H	L	A	P	F	V	P	G	H
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.										.	.	.	.	.	.	.											.
Template Conservation																																																			.	.	.	.																											.
Template Sequence		V	I	A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	.	.	.	.	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	.
Template Known Secondary structure									T	T	T	T		B		S	S				S								T	T			T	T													T	T		G	.	.	.	.	G	G								B																	.
Template Predicted Secondary structure																																																			.	.	.	.																											.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800				.	.	.	.	.	.	.	.	.	810	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	.	.	.	P	V	L	Y	T	G	R	D	G	R	V	A	H	E
Query Conservation																																																																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																															.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	.	.	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V	K	H	V	L	K	N	N	K	Q	F	D	K	E	.	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F	M	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				T	T	T	S	S													T	T	T								.																				T		G	G	G	T	T	T								B	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																															.
Template SS confidence
											301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.	.	.	.	.	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure																											.												.
Query SS confidence																											.												.
Query Sequence		C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	P	T	M	S	F	P	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation																											.												.
Alig confidence						.	.	.	.	.	.	.	.														.							.	.	.	.		.													.
Template Conservation						.	.	.	.	.	.	.	.																					.	.	.	.															.
Template Sequence		I	K	V	H	.	.	.	.	.	.	.	.	D	V	D	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	.	.	.	.	A	L	N	A	T	D	I	R	I	A	F	S	C	V	.	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	S	S													T						.	.	.	.			S	S	S						G	G	G	S	.		G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																					.	.	.	.															.
Template SS confidence
		371	.	.	.									.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions