Job Description P33195 Confidence 99.63% Date Thu Jan 5 11:51:15 GMT 2012 Rank 93 Aligned Residues 284 % Identity 14% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N
Query Conservation
Alig confidence																		.																					.	.	.	.	.	.	.	.
Template Conservation																		.																					.	.	.	.	.	.	.	.
Template Sequence		V	I	L	K	S	M	K	Q	V	E	K	H	S	D	Y	D	.	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	S	.	.	.	.	.	.	.	.	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	S	V	L	H	A	L	D	I	S	Q	Q	E	G	H	F	I	E	T	H	Q	S
Template Known Secondary structure												S		T	T			.					S	S												T	T	T	.	.	.	.	.	.	.	.	T	S	S	S						T	T													T
Template Predicted Secondary structure																		.																					.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.				.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	.	.	.	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L
Query Conservation																																																								.	.	.
Alig confidence						.	.	.	.	.	.	.																									.																			.	.	.
Template Conservation						.	.	.	.	.	.	.																									.
Template Sequence		P	L	T	N	.	.	.	.	.	.	.	H	Y	N	K	V	N	L	H	K	L	V	V	L	T	Y	P	N	Y	Y	G	E	T	F	N	.	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H	G	A	H	F	G	L	Q	G	F	P	D	S	T	L	N	Y	Q	A	D	Y	V	V	Q
Template Known Secondary structure		T	T	T	S	.	.	.	.	.	.	.	S														S	S		T	T	S					.											T	T								T	T		T	T	T	T	S	T	T	S				G	G	G	G	T		S
Template Predicted Secondary structure						.	.	.	.	.	.	.																									.
Template SS confidence
		129	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		S	F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	A	P	Y	R	E	N	I	I	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	F	Q	T	S	S	P	S	Y	L	I	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	T	L	F	F	A	.	.	.	.
Template Known Secondary structure							S	S		T	T								T	T		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.				S		S	S																											.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.														.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S
Query Conservation
Alig confidence		.	.	.																								.	.	.								.	.	.	.	.	.																		.
Template Conservation		.	.	.																								.	.	.								.	.	.	.	.	.																		.
Template Sequence		.	.	.	K	R	A	Q	L	I	E	C	L	E	N	K	G	F	E	M	L	Q	V	D	D	P	L	.	.	.	K	L	L	I	K	Y	E	.	.	.	.	.	.	G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	I	Y	.	L	E	L	A	D	D	Y	Q	A	L	A	I	L	P	L	W	H	H	D	D
Template Known Secondary structure		.	.	.													T							S	S	T	T	.	.	.							T	.	.	.	.	.	.	T	S												T	T			.		S				S	S											T	T
Template Predicted Secondary structure		.	.	.																								.	.	.								.	.	.	.	.	.																		.
Template SS confidence
					272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	E	L	D	R	F	I	D	A	M	L	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	L	F	D	S	L	L	R	K	I	E	D	M
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions