Job Description P33195 Confidence 99.60% Date Thu Jan 5 11:51:15 GMT 2012 Rank 105 Aligned Residues 337 % Identity 13% Template c2pb2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A
Query Conservation
Alig confidence																.	.	.	.											.	.	.										.	.	.																																				.
Template Conservation																.	.	.	.											.	.	.										.	.	.																																				.
Template Sequence		D	F	A	G	G	I	A	V	T	A	L	G	H	C	.	.	.	.	H	P	A	L	V	E	A	L	K	S	.	.	.	Q	G	E	T	L	W	H	T	S	.	.	.	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	D	A	T	F	A	E	R	V	L	F	M	N	S	G	T	E	A	N	E	.	T
Template Known Secondary structure			S	S					T		T	T		B	S	.	.	.	.											.	.	.			T	T						.	.	.	T	T	S																S	S		S						S	S							.
Template Predicted Secondary structure																.	.	.	.											.	.	.										.	.	.																																				.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.		.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.								.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure																										.																											.	.	.	.	.	.	.
Query SS confidence																										.																											.	.	.	.	.	.	.
Query Sequence		G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	.	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	.	.	.	.	.	.	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M
Query Conservation																										.																											.	.	.	.	.	.	.
Alig confidence																										.																											.	.	.	.	.	.	.													.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	.	.	.	D	H	T	C	A	V	V
Template Known Secondary structure														T		T	T								T	T					S	S							S	S						T	T	S	S	S			S							T	T											.	.	.	T	T
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.
		651			.	.	.	.	.	.	.	.	660	.	.	.			.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.					.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure			.	.													.	.																							.	.	.	.
Query SS confidence			.	.													.	.																							.	.	.	.
Query Sequence		V	.	.	T	Y	P	S	T	H	G	V	Y	E	E	T	.	.	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	.	.	.	.	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G
Query Conservation			.	.													.	.																							.	.	.	.
Alig confidence			.	.													.	.																							.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		V	E	P	I	Q	G	E	G	G	V	Q	A	A	T	P	E	F	L	K	G	L	R	D	L	C	D	E	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	.	.	.	.	.	.	.	V	S
Template Known Secondary structure				S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	T	T	T	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	L	T	T	Q	E	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	Q	G	I	H	T	K	R	Q	Q	F	V	Q	H	L	Q	A	I	D	E	Q	F	D	I	F
Template Known Secondary structure											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																						S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.																			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation
Alig confidence												.	.	.	.	.	.																										.	.	.
Template Conservation												.	.	.	.	.	.																										.	.	.
Template Sequence		S	D	I	R	G	M	G	L	L	I	.	.	.	.	.	.	G	A	E	L	K	P	K	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	.	.	.	V	L	N	A	G	A	D	V	M	R	F	A	P	S	L	V	V	E	E	A	D	I	H	E	G	M	Q	R	F	A	Q	A	V	G	K	V
Template Known Secondary structure								T	T			.	.	.	.	.	.						G	G	G	T	T												T	T			.	.	.				S	S	T	T								T	T
Template Predicted Secondary structure												.	.	.	.	.	.																										.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.							.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		883
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions