Job Description P33195 Confidence 99.31% Date Thu Jan 5 11:51:15 GMT 2012 Rank 179 Aligned Residues 279 % Identity 20% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.				.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																																																										.	.	.	.	.
Query SS confidence																	.	.	.																																																										.	.	.	.	.
Query Sequence		Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	.	.	.	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	.	.	.	.	.
Query Conservation																	.	.	.																																																										.	.	.	.	.
Alig confidence																	.	.	.																.										.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																			.										.	.	.	.	.	.
Template Sequence		I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	K	K	V	F	F	S	N	S	G	T	E	A	I	E	.	A	S	I	K	V	V	K	N	T	.	.	.	.	.	.	G	R	K	Y	I	I	A	F	L	G	G	F	H	G	R	T	F	G	S	I	S	L	T	A	S	K	A	V	Q	R	S
Template Known Secondary structure															S	S		S	S								S	S							.								T	T	.	.	.	.	.	.	S								T	T					S	S									S		G	G	G	G
Template Predicted Secondary structure																																			.										.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
										619	620	.	.	.	.	.	.	.	.	.																				630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	V	V	V	V	A	C	D	K	N	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	.	Y	P	S	T	H	G	V	Y	E	E	T	.	.	.	I	R	E	V
Query Conservation		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.												.	.	.
Template Conservation
Template Sequence		I	V	G	P	F	M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V	N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	G	I	F	F	E	P	I	Q	G	E	G	G	Y	V	I	P	P	K	N	F	F	A	E	L
Template Known Secondary structure		S	S					T	T									S	S	S		T	T				T	T	T																T					T			G	G	G								S	S	B	T	T	T	T	S	B				T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.									700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	.	.	.	.	.	.	.	.	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.											.	.	.	.	.	.	.	.				.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	L	A	K	K	Y	G	I	L	L	V	D	D	E	V	Q	M	.	.	.	.	G	L	G	R	T	G	K	L	F	A	I	E	N	F	N	T	V	P	D	V	I	.	.	.	.	.	.	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T								T	T	T	.	.	.	.	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.	.	.	.	.				G	G	G	G	T	T	T	S									G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	F	K	T	F	G	G	N	A	L	A	C	A	I	G	S	K	V	I	D	I	V	.	.	.	.	.	K	D	L	L	P	H	V	N	E	I	G	K	I	F	A	E	E	L	Q	G	L	A	D	D	V	R	G	I	G	.	.	.	L	A	W	G	L	E	Y	N	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																			T	T	S	S	S						T	.	.	.	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																														.	.	.
Template SS confidence
														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.
		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.		.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	.	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I
Query Conservation																																		.
Alig confidence								.	.	.	.	.	.	.														.	.	.	.			.
Template Conservation								.	.	.	.	.	.	.														.	.	.	.
Template Sequence		K	K	V	R	D	R	.	.	.	.	.	.	.	I	I	G	E	S	F	K	R	G	L	L	L	L	.	.	.	.	P	A	G	R	S	A	I	R	V	I	P	P	L	V	I	S	E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V	V
Template Known Secondary structure								.	.	.	.	.	.	.								T	T					.	.	.	.			T	T	T								T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		366	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions