Job Description P33195 Confidence 99.50% Date Thu Jan 5 11:51:15 GMT 2012 Rank 131 Aligned Residues 338 % Identity 14% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560		.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	.	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																																																																.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.															.																	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	P	K	V	L	A	R	V	R	E	T	L	E	R	G	L	T	F	G	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T	M	.
Template Known Secondary structure			S	S	G	G	G	T	T		T	T		B	T														T		S			S	S			.	.	.	.	.	.	.	.	.	.	.	.															T	T								S	S							.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.													.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630															.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	T	D	L	R	A	K	A	E	Q	A	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		S	A	L	R	L	A	R	G	Y	T	.	.	.	.	.	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G
Template Known Secondary structure												.	.	.	.	.									T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T						T	T													G
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.				.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.				.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																																							.	.	.
Query SS confidence																	.	.	.																																							.	.	.
Query Sequence		D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	.	.	.	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	.	.	.	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G
Query Conservation																	.	.	.																																							.	.	.
Alig confidence																	.	.	.																																							.	.	.														.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		E	E	I	A	A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	R	L	A	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	T	L	G	K	I	L	G	.	.	.	.	.	.	.	G
Template Known Secondary structure		G	G								S	S	B		T	T	S		B													G	G	G	G	T								T	T	T	T	T	T	S	S	T	T							T				S						G	G	G	G	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	.
Query Conservation																																																																																	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																	.	.																			.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		G	L	P	A	A	A	Y	A	G	R	R	E	I	M	E	K	V	.	.	.	.	.	.	.	.	.	.	A	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	L	L	E	E	N	.	.	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K
Template Known Secondary structure		T	S	S												T	T	B	.	.	.	.	.	.	.	.	.	.	T	T	T	S	S	B					T	T		S																			.	.	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.											.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
					797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.		.	.					.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																		.			.	.	.	.
Query SS confidence		.	.	.																		.			.	.	.	.
Query Sequence		.	.	.	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	.	E	C	.	.	.	.	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L
Query Conservation		.	.	.																		.			.	.	.	.
Alig confidence		.	.	.																		.			.	.	.	.																														.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		E	V	L	K	E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	G	I	Y	W	.	.	.	.	.	P	P	S	N	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V
Template Known Secondary structure							T	T									T	T						S	S	S	S				S					T	T	S														T	T	T				.	.	.	.	.		S	S	S	S	S						T	T
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		869	870	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	F	I	D	A	M	L	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	T	L	E	A	L	R	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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