Job Description P33195 Confidence 99.87% Date Thu Jan 5 11:51:15 GMT 2012 Rank 26 Aligned Residues 309 % Identity 21% Template c2dkjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase Resolution 1.15 Å

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		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.				.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	.	.	.	A	H	M	A	G	M	Q
Query Conservation																																																																								.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		C	E	V	I	D	R	V	E	S	L	A	I	E	R	A	K	A	L	F	G	A	A	W	A	N	V	Q	P	H	S	G	S	Q	A	N	M	A	V	Y	M	A	L	M	.	.	.	.	.	.	.	.	E	P	G	D	T	L	M	G	M	D	L	A	A	G	G	H	L	T	H	G	S	R	V	N	F	S	G	K	L
Template Known Secondary structure																					T		S							S	S														.	.	.	.	.	.	.	.		T	T								G	G	G	T			G	G	G	T		T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		619	620	.	.	.	.	.				.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.		.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure									.	.	.																																																												.
Query SS confidence									.	.	.																																																												.
Query Sequence		V	V	V	V	A	C	D	.	.	.	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	M	N	A	Q	V	G	I	T	S	P
Query Conservation									.	.	.																																																												.
Alig confidence									.	.	.																.	.	.																				.																						.
Template Conservation																											.	.	.																				.
Template Sequence		Y	K	V	V	S	Y	G	V	R	P	D	T	E	L	I	D	L	E	E	V	R	R	L	A	L	.	.	.	E	H	R	P	K	V	I	V	A	G	A	S	A	Y	P	R	F	W	D	.	F	K	A	F	R	E	I	A	D	E	V	G	A	Y	L	V	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P
Template Known Secondary structure		S									T	T	T		S												.	.	.					S							S	S			S				.												T								T	T	T						T	T	S	S
Template Predicted Secondary structure																											.	.	.																				.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		695	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	F	I	.	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M
Query Conservation					.
Alig confidence					.														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	L	P	Y	A	H	V	V	T	S	T	T	H	K	T	L	.	.	.	.	.	.	R	G	P	R	G	G	L	I	L	S	N	D	P	E	L	G	K	R	I	D	K	L	I	F	P	G	I	.	.	.	.	.	.	.	.	.	.	.	Q	G	G	P	L	E	H	V	I	A	G	K	A	V	A	F	F	E	A
Template Known Secondary structure				T	T	T		S						S	S	G	G	G	.	.	.	.	.	.				S							S													T	T	T	T	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.												.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	.	.	.	.	.	P	T	M	S
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																							.	.											.	.	.	.																			.	.	.	.	.
Template Conservation																																							.	.											.	.	.	.
Template Sequence		L	Q	P	E	F	K	E	Y	S	R	L	V	V	E	N	A	K	R	L	A	E	E	L	A	R	R	G	Y	R	I	V	T	G	G	T	D	N	.	.	H	L	F	L	V	D	L	R	P	K	.	.	.	.	G	L	T	G	K	E	A	E	E	R	L	D	A	V	G	I	T	V	N	K	N	A	I	P	F	D	P
Template Known Secondary structure		T	S																							T	T	T				G	G	G	S		S	S	.	.	S							G	G	G	.	.	.	.	T												T	T	T									T	T
Template Predicted Secondary structure																																							.	.											.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		849	850			.	.	.	.	.	.	.	.	.	860	.	.	.	.					.	.	.	.	.	870	.	.	.	.	.	.	.										.	.	880	.	.	.	.	.
Predicted Secondary structure				.	.															.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence				.	.															.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		F	P	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	.	.	.	.	K	V	E	L	D	R	F	I	D	A	M	L	A	.	.	.	.	.	.	.	.	.	I	R	A	E	I	D	Q	V
Query Conservation				.	.															.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence				.	.															.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	P	R	V	T	S	G	I	R	I	G	T	P	A	I	T	T	R	G	F	T	P	E	E	M	P	L	V	A	E	L	I	D	R	A	L	L	E	G	P	S	E	A	L	R	E	E	V	R	R	L
Template Known Secondary structure		S		T	T	T		S												T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions