Job Description P33195 Confidence 99.47% Date Thu Jan 5 11:51:15 GMT 2012 Rank 140 Aligned Residues 331 % Identity 14% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560		.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	.	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																																																																.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.															.																	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		D	F	F	G	G	H	G	A	L	V	L	G	H	G	H	P	R	V	N	A	A	I	A	E	A	L	S	H	G	V	Q	Y	A	A	S	H	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	V	R	W	A	E	R	I	V	A	A	F	P	S	I	R	K	L	R	F	T	G	S	G	T	E	T	T	L	.
Template Known Secondary structure			S		T	T	T	T	S		T	T		B	T													T	T	T		S	S		S	S		.	.	.	.	.	.	.	.	.	.	.	.															T	T		S						S								.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.													.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	S	T
Query Conservation																																																																															.
Alig confidence											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																									.
Template Conservation											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		L	A	L	R	V	A	R	A	F	.	.	.	.	.	.	T	G	R	R	M	I	L	R	F	E	G	T	T	.	.	.	.	.	.	.	.	.	.	.	A	N	T	L	L	I	R	P	D	.	.	.	.	.	D	I	E	G	M	R	E	V	F	A	N	H	G	S	D	I	A	A	F	I	A	E	P	V	G	S	H
Template Known Secondary structure											.	.	.	.	.	.													G	.	.	.	.	.	.	.	.	.	.	.	G	G						T	T	.	.	.	.	.													G	G	G								S	S
Template Predicted Secondary structure											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.												150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		657	.	.	660	.	.				.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure								.	.	.																																			.
Query SS confidence								.	.	.																																			.
Query Sequence		H	G	V	Y	E	E	.	.	.	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	.	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P
Query Conservation								.	.	.																																			.
Alig confidence								.	.	.																																			.																.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		F	G	V	T	P	V	S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	A	L	F	I	L	D	E	V	I	S	G	F	R	V	G	N	H	G	M	Q	A	L	L	D	V	Q	P	D	L	T	C	L	A	K	A	S	A	.	.	.	.	.	G	G	L	P	G	G	I	L	G	G	R	E	D	V	M	G
Template Known Secondary structure				T																		T	T								T	T	T	T	T	T	T		T	T							T				S						G	G	G	G	.	.	.	.	.	T	T	S	S												T
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	T	I	L	E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R	K	G	L	N	W	L	A	Y	G	R	F	S	G	F
Template Known Secondary structure		T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																							T	T																							T	T									T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		289	290																	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		813	.	.	.	.												.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	C	I	L	.	.	.	.	.	.	.	.	.	.	.	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E
Query Conservation							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		H	L	M	P	G	L	P	P	N	T	T	D	T	G	S	I	T	R	A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	.	.	.	.	.	.	.	G	G	R	G	S	V	F	L	S	A	Q	H	E	R	E	H	V	E	H	L	V	T	T	F	D	R	V	L	D	R
Template Known Secondary structure						T	S		T	T									T	T		S																		T	T				.	.	.	.	.	.	.	B	T	T	T						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.								.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		882	.	.	.	.	.	.	.	890	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Q	V	K	A	G	V	W	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	E	N	L	L	S	W	Q	G
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions