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Job DescriptionP33195
Confidence99.37%DateThu Jan 5 11:51:15 GMT 2012
Rank172Aligned Residues333
% Identity17%Templatec2cjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   517..520.........530.........540.........550.........560... ......570.........580.........590
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Query Sequence  NAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYD. . AVCMQPNSGAQGEYAGLLAIRHYHESR. . . .
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Template Sequence  PPALVDDREFHAELMQAALNKP. SNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAH
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   72.......80.........90... ......100.........110.........120.........130.........140.........150
 
   591........600.........610........ .620.........630. ........640....
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Query Sequence  . . . NEGHRDICLIPASAHGTNPASAHMAGMQ. . . . . . . . . . . . . VVVVACDKNGNID. . . . . . . . . . LTDLRAKAEQAGD
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Template Sequence  GIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPH
Template Known Secondary structure  TS
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SSTTGGGT

S
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STT
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   645....650.........660... ......670.........680.........690......... 700.........710..
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Query Sequence  NLSCIMVTYPSTHGVYEET. . . . IREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGA. . . . . . . . DVSHLNLHKTFCI
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Template Sequence  DIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEV. . . . QTGCGLTGTAWAYQQLDVAPDIV. . . . . . AFGK
Template Known Secondary structure  T
SSTTT


TT

T....TTTTTTTSSSSTT


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   231........240.........250.........260.........270... ......280.........290...... ...300
 
   713......720.........730.........740.........750.........760.........770.........780.........790..
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Query Sequence  PHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYI
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Template Sequence  KTQVCGVMAGRRVDEVADNVFA. . . . . . . . . . . . . VPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRAR
Template Known Secondary structure  GGSS
GGGGGSTT
TTT.............STTSS

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   301........310.........320.. .......330.........340.........350.........360.......
 
   793......800.........810 .........820.........830.........840.........850. ........860.........870
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Query Sequence  ASRLQDAFPVLYTGRDGR. VAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPV. AGTLMVEPTESESKVELDR
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Template Sequence  LDELAADFPAVVLDPRGRGLMCAFSLPTTADRDE. . . . . . . LIRQLWQRAVIVL. . . . PAGADTVRFRPPLTVSTAEIDA
Template Known Secondary structure  STTTSTT
SS.......TT
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   368.370.........380.........390.........400. ........410.... .....420.........430......
 
   871........880....
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Query Sequence  FIDAMLAIRAEIDQ
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Template Sequence  AIAAVRSALPVVTK
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   437..440.........450
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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