Job Description P33195 Confidence 99.50% Date Thu Jan 5 11:51:15 GMT 2012 Rank 130 Aligned Residues 321 % Identity 16% Template c1z7dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii Resolution 2.10 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A
Query Conservation
Alig confidence																.	.	.	.																						.	.	.	.	.	.																																		.
Template Conservation																.	.	.	.																						.	.	.	.	.	.																																		.
Template Sequence		D	F	L	S	A	Y	S	S	V	N	Q	G	H	C	.	.	.	.	H	P	N	I	L	N	A	M	I	N	Q	A	K	N	L	T	I	C	S	R	A	.	.	.	.	.	.	F	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	K	V	L	M	M	N	T	G	A	E	A	N	E	.	T
Template Known Secondary structure			S	S					T	T	T	T		B	T	.	.	.	.													T	T		S				T	T	.	.	.	.	.	.	S																	T		S						S	S							.
Template Predicted Secondary structure																.	.	.	.																						.	.	.	.	.	.																																		.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.	.
Template Sequence		A	Y	K	L	C	R	K	W	G	Y	E	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	P	E	N	M	A	K	I	V	V	C	F	S	K	V	P	Y	D	.	.	.	.	.	D	L	E	A	L	E	E	E	L	K	D	.	.	P	N	V	C	A	F	I	V	E	P	I	Q	G	E	A
Template Known Secondary structure													T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T													T	T	.	.	.	.	.										T	S	.	.	T	T								S	S	B	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130																.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
				659	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.							.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.			.	.																																					.	.	.	.	.	.
Query SS confidence		.	.			.	.																																					.	.	.	.	.	.
Query Sequence		.	.	V	Y	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	.	.	.	.	.	.	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A
Query Conservation		.	.			.	.																																					.	.	.	.	.	.
Alig confidence		.	.			.	.																									.	.	.	.									.	.	.	.	.	.																.	.	.	.
Template Conservation																																.	.	.	.																														.	.	.	.
Template Sequence		G	V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E	V	Q	.	.	.	.	T	G	L	G	R	T	G	K	L	L	C	V	H	H	Y	N	V	K	P	D	V	I	L	L	G	K	A	L	S	.	.	.	.	G	G	H	Y	P	I	S	A	V	L	A	N	D
Template Known Secondary structure		T		B				T	T												T	T								T	T	.	.	.	.	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																																.	.	.	.																														.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	M	L	V	I	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I	V	R	D	V	R	G	K
Template Known Secondary structure					T	T		.	.	.	.	.	.	.	.	.	.	.	.										T	T																		T	T																				T	T	T		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.													.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D
Query Conservation																																												.
Alig confidence					.	.	.							.	.	.	.																						.	.	.	.		.
Template Conservation					.	.	.							.	.	.	.																						.	.	.	.
Template Sequence		G	L	L	.	.	.	C	A	I	E	F	K	.	.	.	.	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	.	.	.	.	D	V	H	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I	I	V	K	T	V	K	F	F	D
Template Known Secondary structure		T	T		.	.	.							.	.	.	.	T	T	T													T	T					.	.	.	.			T	T	T								T	T																				T
Template Predicted Secondary structure					.	.	.							.	.	.	.																						.	.	.	.
Template SS confidence
		346	.	.				.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions