Job Description P00550 Confidence 72.93% Date Thu Jan 5 10:56:43 GMT 2012 Rank 56 Aligned Residues 83 % Identity 23% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.								.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.																.	.	.	.	.	.	.
Query SS confidence																																														.																.	.	.	.	.	.	.
Query Sequence		R	K	I	I	V	A	C	D	A	G	M	G	S	S	A	M	G	A	G	V	L	R	K	K	I	Q	D	A	G	L	S	Q	I	S	V	T	N	S	A	I	N	N	L	P	.	P	D	V	D	L	V	I	T	H	R	D	L	T	E	R	.	.	.	.	.	.	.	A	M	R	Q	V	P	Q	A	Q	H	I	S	L
Query Conservation																																														.																.	.	.	.	.	.	.
Alig confidence												.														.	.																			.																.	.	.	.	.	.	.
Template Conservation												.														.	.
Template Sequence		Q	R	I	L	V	V	D	D	D	A	.	S	L	A	E	M	L	T	I	V	L	R	G	E	.	.	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L
Template Known Secondary structure									S			.													T	.	.	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure												.														.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	F	L	D	S	G	L	Y	T	S	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	K	T	D	T	V	D	V	V	L	G	L	E
Template Known Secondary structure				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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