Job Description P00550 Confidence 29.69% Date Thu Jan 5 10:56:43 GMT 2012 Rank 128 Aligned Residues 145 % Identity 11% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		L	I	E	A	N	P	G	P	G	M	G	V	L	L	A	Y	M	F	F	G	R	G	S	A	K	Q	S	A	G	G	A	A	I	I	H	F	L	G	G	I	H	E	I	Y	F	P	Y	V	L	M	N	P	R	L	I	L	A	V	I	L	G	G	M	T	G	V	F	T	L	T	I	L	G	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H
Template Known Secondary structure																			T	S	T	T											G	G	G						T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
						289	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310										.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.													.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.													.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	G	L	V	S	P	A	S	P	G	S	I	.	.	.	L	A	V	L	A	M	T	P	K	G	.	.	.	.	.	.	.	.	.	A	Y	F	A	N	I	A	G	V	C	A	A	M	A	V	S	F	V	V	S	A	I	L	L	K	T	S	K	V	K	E	E	D	D	I	E	A	A	T	R	R	M
Query Conservation		.	.	.	.													.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.													.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y
Template Known Secondary structure					T	T						T																																																			T	S	T	T	S					T	T	S	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		353	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	M	K	A	E	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	M	P	E	G	N	S
Template Known Secondary structure		S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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