Job Description P00550 Confidence 26.00% Date Thu Jan 5 10:56:43 GMT 2012 Rank 149 Aligned Residues 57 % Identity 9% Template c3dmqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna polymerase-associated protein rapa; PDBTitle: crystal structure of rapa, a swi2/snf2 protein that2 recycles rna polymerase during transcription Resolution 3.20 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		S	H	V	R	K	I	I	V	A	C	D	A	G	M	G	S	S	A	M	G	A	G	V	L	R	K	K	I	Q	D	A	G	L	S	Q	I	S	V	T	N	S	A	I	N	N	L	P	.	.	.	.	P	D	V	D	L	V	I	T	H	R	D	L
Query Conservation																																																	.	.	.	.
Alig confidence																.					.																												.	.	.	.
Template Conservation																.					.
Template Sequence		G	A	A	E	R	V	L	I	I	V	P	E	T	L	.	Q	H	Q	W	.	L	V	E	X	L	R	R	F	N	L	R	F	A	L	F	D	D	E	R	Y	A	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	C	S	L	D	F
Template Known Secondary structure		S	S										T	T	T	.					.								S																		T	T		S	S	S	T	T		S
Template Predicted Secondary structure																.					.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions