Job Description P00550 Confidence 52.60% Date Thu Jan 5 10:56:43 GMT 2012 Rank 90 Aligned Residues 125 % Identity 14% Template c3cz5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1 Resolution 2.70 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.									.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.															.	.	.	.	.	.	.	.
Query SS confidence																																														.															.	.	.	.	.	.	.	.
Query Sequence		K	I	I	V	A	C	D	A	G	M	G	S	S	A	M	G	A	G	V	L	R	K	K	I	Q	D	A	G	L	S	Q	I	S	V	T	N	S	A	I	N	N	L	P	P	.	D	V	D	L	V	I	T	H	R	D	L	T	E	R	.	.	.	.	.	.	.	.	A	M	R	Q	V	P	Q	A	Q	H	I	S	L
Query Conservation																																														.															.	.	.	.	.	.	.	.
Alig confidence											.																																			.															.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		R	I	M	L	V	D	D	H	P	.	I	V	R	E	G	Y	R	R	L	I	E	R	R	P	G	Y	A	V	V	A	E	A	A	D	A	G	E	A	Y	R	L	Y	R	E	T	T	P	D	I	V	V	M	D	L	T	L	P	G	P	G	G	I	E	A	T	R	H	I	R	Q	W	D	G	A	A	R	I	L	I	F
Template Known Secondary structure								S			.												T	S	T	T								S	S														S						S			S	S	S														T	T
Template Predicted Secondary structure											.
Template SS confidence
		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	F	L	D	S	G	L	Y	T	S	L	T	E	R	L	V	A	A	Q	R	H	T	A	N	E	E	K	V	K	D	S	L	K	D	S	F	D	D	S	S	A	N	L	F	K	L	G	A	E	N	I	F	L	G	R	K	A	A	T	K	E	E	A	I	R	F	A	G	E	Q	L	V	K	G	G	Y	V	E	P
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	H	Q	G	S	A	F	A	L	K	A	F	E	A	G	A	S	G	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	S	S	D	P	A	E	L	V	Q	A	I	E	A	I	L	A	G	R	R	A	M	S	P
Template Known Secondary structure			S			S											T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		T	T											T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																																			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	V	Q	A	M	L	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	A	Q	E	I	A	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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