Job Description P00550 Confidence 26.12% Date Thu Jan 5 10:56:43 GMT 2012 Rank 148 Aligned Residues 83 % Identity 22% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.								.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.															.	.	.	.	.	.	.
Query SS confidence																																															.															.	.	.	.	.	.	.
Query Sequence		R	K	I	I	V	A	C	D	A	G	M	G	S	S	A	M	G	A	G	V	L	R	K	K	I	Q	D	A	G	L	S	Q	I	S	V	T	N	S	A	I	N	N	L	P	P	.	D	V	D	L	V	I	T	H	R	D	L	T	E	R	.	.	.	.	.	.	.	A	M	R	Q	V	P	Q	A	Q	H	I	S	L
Query Conservation																																															.															.	.	.	.	.	.	.
Alig confidence								.																		.	.																				.															.	.	.	.	.	.	.
Template Conservation								.																		.	.
Template Sequence		K	K	I	L	V	V	.	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	.	.	G	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L
Template Known Secondary structure								.		S																.	.	T								S														S						T	T		S	S	S															S
Template Predicted Secondary structure								.																		.	.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	F	L	D	S	G	L	Y	T	S	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	K	D	S	E	I	D	K	V	I	G	L	E
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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