Job Description P00550 Confidence 22.07% Date Thu Jan 5 10:56:43 GMT 2012 Rank 167 Aligned Residues 161 % Identity 10% Template c2q4dB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 Resolution 2.15 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																				.	.	.																		.	.	.	.	.	.																							.	.
Query SS confidence																				.	.	.																		.	.	.	.	.	.																							.	.
Query Sequence		H	V	R	K	I	I	V	A	C	D	A	G	M	G	S	S	A	M	.	.	.	G	A	G	V	L	R	K	K	I	Q	D	A	G	L	S	Q	I	.	.	.	.	.	.	S	V	T	N	S	A	I	N	N	L	P	P	D	V	D	L	V	I	T	H	R	D	.	.	L	T	E	R	A	M	R	Q	V	P	Q	A
Query Conservation																				.	.	.																		.	.	.	.	.	.																							.	.
Alig confidence																				.	.	.																		.	.	.	.	.	.																							.	.					.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		R	F	R	K	I	C	V	F	C	G	S	H	S	G	H	R	E	V	F	S	D	A	A	I	E	L	G	N	E	L	V	K	R	K	I	D	L	V	Y	G	G	G	S	V	G	L	X	G	L	I	S	R	R	V	Y	E	G	G	L	H	V	L	G	I	I	P	K	A	L	X	P	I	.	.	.	.	.	.	E	I
Template Known Secondary structure				S								S				S	S																	T	T									S	S														S	S							B	G	G	G				.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	S	L	T	N	F	L	D	S	G	L	Y	T	S	L	T	E	R	L	V	A	A	Q	R	H	T	A	N	E	E	K	V	K	D	S	L	K	D	S	F	D	D	S	S	A	N	L	F	K	L	G	A	E	N	I	F	L	G	R	K	A	A	T	K	E	E	A	I	R	F	A	G	E	Q	L	V	K	G
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence		S	G	E	T	V	G	D	V	R	V	V	A	D	X	H	E	R	K	A	A	X	A	Q	E	A	E	A	F	I	A	L	P	G	G	Y	G	T	X	E	E	L	L	E	X	I	T	W	S	Q	L	G	I	H	K	K	T	V	G	L	L	N	V	D	G	Y	Y	N	N	L	L	A	L	F	.	D	T	G	V	E	E
Template Known Secondary structure			S	S			S					B	S	S											T		S	B					S		S																	T	S										G	G	G	T	T								.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
		525	.	.	.	.	530	.	.										.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	V	E	P	E	Y	V	.	.	.	.	.	.	.	.	.	Q	A	M	L	D	R	E	K	L	T	P
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	I	K	P	G	A	R	N	I	V	V	S	A	P	T	A	K	E	L	X	E	K	X	E	E	Y	T
Template Known Secondary structure		T	S	S		T	T	G	G	G	G					S	S										S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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