Job Description P00550 Confidence 22.42% Date Thu Jan 5 10:56:43 GMT 2012 Rank 162 Aligned Residues 172 % Identity 12% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		A	K	I	L	F	L	N	N	A	I	N	H	G	I	F	S	P	L	G	I	Q	Q	S	H	E	L	G	K	S	I	F	F	L	I	E	A	N	P	G	P	G	M	G	V	L	L	A	Y	M	F	F	G	R	G	S	A	K	Q	S	A	G	G	.	.	A	A	I	I	H	F	L	G	G	I	H	E	I	Y	F	P
Query Conservation																																																																.	.
Alig confidence																																																																.	.												.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	.	.	.	.	P
Template Known Secondary structure																						G	G	G	S	S	S	S																													S																			T	.	.	.	.	T
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.
		262	.		.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310																					.	.
Predicted Secondary structure				.						.																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.						.																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	.	L	M	N	P	R	.	L	I	L	A	V	I	L	G	G	M	T	G	V	F	T	L	T	I	L	G	.	.	.	.	.	.	.	G	G	L	V	S	P	A	S	P	G	S	I	L	A	V	L	A	M	T	P	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y
Query Conservation				.						.																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.						.																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L
Template Known Secondary structure		T	T	T	T																											T	T				T	T																											S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	N	I	A	G	V	C	A	A	M	A	V	S	F	V	V	S	A	I	L	L	K	T	S	K	V	K	E	E	D	D	I	E	A	A	T	R	R	M	Q	D	M	K	A	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	L	R	V	S	S	Q	E	E	Y	V	G	L	D	L	S	Q	H	E	E	V	A
Template Known Secondary structure																										T		S	B																			S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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