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Job DescriptionP75906
Confidence99.90%DateThu Jan 5 12:15:53 GMT 2012
Rank8Aligned Residues174
% Identity17%Templated2c1ia1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.... .....130.........140.........150.........160.........170.........180.....
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Query Sequence  KAVVLTFDDGYQSFYTRV. FPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHT
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Template Sequence  KVVALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVS. . . . . . . . . . . . . . . . . . . GNEDLVKRIKSEG. HVVGNHS
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TTTTT



GGGTT...................T
TT.


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   268.270.........280.........290.........300....... ..310.........320 .......
 
   186...190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  WNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKK
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Template Sequence  WSHPILSQLS. . . . . . . . . . . . . . . . . . . . . . . . . . . LDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRNSLDL
Template Known Secondary structure  SS


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   328.330....... ..340.........350.........360.........370.........380
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  LGYDMFFTLESGLANASQLDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKD
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Template Sequence  SFIMWDVDSLDW. . . . . . . . . . . . . . . . KSKNEASILTEIQHQVANGSIVLMH. . . . . . . . DIHSPTVNALPRVIEYLKN
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   381........390.. .......400.........410....... ..420.........430......
 
   346...350.
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Query Sequence  MQISTV
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Template Sequence  QGYTFV
Template Known Secondary structure  TT

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   437..440..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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