Job Description P75906 Confidence 35.39% Date Thu Jan 5 12:15:53 GMT 2012 Rank 298 Aligned Residues 214 % Identity 12% Template d1vema2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.85

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	S	P	Q	R	I	M	H	I	D	L	D	Y	V	Y	D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L
Query Conservation
Alig confidence																	.	.	.																														.	.	.	.	.	.	.	.	.																						.
Template Conservation																	.	.	.																														.	.	.	.	.	.	.	.	.																						.
Template Sequence		N	P	D	Y	K	A	Y	L	M	A	P	L	K	K	I	.	.	.	P	E	V	T	N	W	E	T	F	E	N	D	L	R	W	A	K	Q	N	G	F	Y	A	I	T	V	D	F	W	.	.	.	.	.	.	.	.	.	W	G	D	M	E	K	N	G	D	Q	Q	F	D	F	S	Y	A	Q	R	F	A	.	Q	S
Template Known Secondary structure			T	T									S	S		G	.	.	.	G	G	T	S															T	T										.	.	.	.	.	.	.	.	.					T		S	S	T	T												.
Template Predicted Secondary structure																	.	.	.																														.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																		.	.	.	.																							.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																							.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	.	.	.	.	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	.	.	.	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.																							.	.	.																												.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																							.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	N	A	G	M	K	M	I	P	I	I	S	T	H	Q	C	G	G	N	V	G	D	D	C	N	V	P	I	P	S	W	V	W	N	Q	K	S	D	D	S	L	Y	F	K	S	E	T	G	T	V	N	K	E	T	L	N	P	L	A	S	D	V	I	R	K	E	Y	G	E	L	Y	T	A	F	A	A	A	M	K
Template Known Secondary structure					T	T										S		B	S	S	S	T	T					B				G	G	G	G	G	G		S	S	S		S	S				T	T						S	S			T	T																				T	G
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
																								455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.																			.	.	490	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	G	S	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		P	Y	K	D	V	I	A	K	I	Y	L	S	G	G	P	A	G	E	L	R	Y	P	S	Y	T	T	S	D	G	T	G	Y	P	S	R	.	.	.	G	K	F	Q	A	Y	T	E	F	A	K	S	K	F	R	L	W	V	L	N	K	Y	G	S	L	N	E	V	N	K	A	W	G	T	K	L	I	S	E	L	A	I
Template Known Secondary structure		G	G	G	G	G	B								S	G	G	G	B	S	S						T	T	T	T			T	T	S		.	.	.							S																S	S									T				S	S	G	G	G
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		495	.	.	.	.	500	.										.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.			.																										.	.
Query SS confidence									.	.	.	.	.	.	.	.	.			.																										.	.
Query Sequence		E	I	R	Q	N	P	E	.	.	.	.	.	.	.	.	.	Q	F	.	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	.	.	R	G	P	H	I	K	T	A	R	N	I
Query Conservation									.	.	.	.	.	.	.	.	.			.																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.			.																										.	.
Template Conservation
Template Sequence		L	P	P	S	D	G	E	Q	F	L	M	N	G	Y	L	S	M	Y	G	K	D	Y	L	E	W	Y	Q	G	I	L	E	N	H	T	K	L	I	G	E	L	A	H	N	A	F	D	T	T	F	Q	V	P	I	G	A	K	I
Template Known Secondary structure			S		S								T	G	G	G	S																														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions