Job Description P75906 Confidence 97.87% Date Thu Jan 5 12:15:53 GMT 2012 Rank 63 Aligned Residues 173 % Identity 13% Template d1ud2a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.13

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																							.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																														.	.																							.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	.	.	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	.	.	.	.	.	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	.	.	.
Query Conservation																														.	.																							.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																														.	.																							.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		N	R	L	H	D	D	A	A	A	L	S	D	A	G	I	T	A	I	W	I	P	P	A	Y	K	G	N	S	Q	A	D	V	G	Y	G	A	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	T	V	R	T	K	Y	G	T	K	A	Q	L	E	R	A	I	G	S	L	K	S	N	D	I	N	V	Y	G	D	V	V
Template Known Secondary structure															T										S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
																																																								400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	H	K	M	G	A	D	F	T	E	A	V	Q	A	V	Q	V	N	P	T	N	R	W	Q	D	I	S	G	A	Y	T	I	D	A	W	T	G	F	D	F	S	G	R	N	N	A	Y	S	D	F	K	W	R	W	F	H	F	N	G	V	D	W	D	Q	R	Y	Q	E	N	H	I	F	R	F	A	N	T	N	W
Template Known Secondary structure			S						S												T	T							S											B			G	G	G	T	T	S	S					B		G	G	G								T	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		426	.	.	.	430	.	.										.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																																														.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																																														.	.	.
Query Sequence		Q	I	H	P	E	Q	Y	.	.	.	.	.	.	.	.	.	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.																																																														.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																	.	.																												.	.	.
Template Conservation																																																		.	.
Template Sequence		N	W	R	V	D	E	E	N	G	N	Y	D	Y	L	L	G	S	N	I	D	F	S	H	P	E	V	Q	D	E	L	K	D	W	G	S	W	F	T	D	E	L	D	L	D	G	Y	R	L	.	.	D	A	I	K	H	I	P	F	W	Y	T	S	D	W	V	R	H	Q	R	N	E	A	D	Q	D	L	F	V	V	G
Template Known Secondary structure			S	S				T	T	S						S	S					T	T	S																			T		S					.	.	T	T	G	G	G	S																	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	W	K	D	D	V	G	A	L	E	F	Y	L	D
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions