 |
Job Description | P75906 | Confidence | 47.65% | Date | Thu Jan 5 12:15:53 GMT 2012 |
Rank | 281 | Aligned Residues | 52 |
% Identity | 21% | Template | d1j3ga_ |
SCOP info | N-acetylmuramoyl-L-alanine amidase-like
| N-acetylmuramoyl-L-alanine amidase-like
| N-acetylmuramoyl-L-alanine amidase-like
|
Resolution | UNK |
|
 |
  |   |
436 | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | |
|
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | F | D | D | R | V | R | A | Q | V | G | M | L | Y | E | D | L | A | G | H | A | A | F | . |
. |
D | G | I | L | F | H | D | D | A | L | L | S | D | Y | E | D | A | S | A | P | A | I | T | A | Y | Q | Q | A | G | F | S | G | S | L | S | E | I | R | Q | N | P | E | Q | F | K | Q | W | A | R | F | K | S |
Query Conservation |   |
  |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
| . | . |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|
|   |
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |
|   |
|   |   |
|   |   |
Template Sequence |   |
L | A | Y | T | D | A | Q | Y | Q | Q | L | A | A | V | T | N | A | L | I | T | R | Y | P | A | I | A | N | N | M | T | G | H | C | N | I | A | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | K | T | D | P | G | P | S | F | D | W | A | R | F | R | A |
Template Known Secondary structure |   |
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | G | G | G |
|  |  |
| S | S | T | T | S |
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
| S | S | S | S |
|
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|