Job Description P75906 Confidence 96.32% Date Thu Jan 5 12:15:53 GMT 2012 Rank 160 Aligned Residues 252 % Identity 15% Template d1itxa1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Type II chitinase Resolution 1.10

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																																								.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	S	R	V	A	W
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		K	V	T	H	I	N	Y	.	A	F	A	D	I	C	W	N	G	I	H	G	N	P	D	P	S	G	P	N	P	V	T	W	T	C	Q	N	E	K	S	Q	T	I	N	V	P	N	G	T	I	V	L	G	D	P	W	I	D	T	G	K	T	F	A	G	D	T	W	D	Q	P	I	A	G	N	I	N	Q	L	N	K
Template Known Secondary structure		G		S					.							B	T	T							T	T	S	S								B		T	T	S		B					T	T					S	S						T	S			T	T			S	S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		69	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D
Query Conservation
Alig confidence												.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Q	T	N	P	N	L	K	T	.	.	.	.	.	I	I	S	V	G	G	W	T	W	S	N	R	F	S	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	T	A	A	T	R	E	V	F	A	N	S	A	V	D	F	L	R	K	Y	N	F	D	G	V	D	L	D	W	E
Template Known Secondary structure						S	T	T				.	.	.	.	.							S	S	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S																			T		S							S
Template Predicted Secondary structure												.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	S	G	G	L	D	G	N	S	K	R	P	E	D	K	Q	N	Y	T	L	L	L	S	K	I	R	E	K	L	D	A	A	G	A	V	.	.	.	.	.	.	.	.	D	G	K	K	Y	L	L	T	I	A	S	G	A	S	A	.	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S		S		T	T	S				T	T																							.	.	.	.	.	.	.	.		T	S											S		.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		205																	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.					.	.	.	.	.	.	.	580	.	.	.	.	.	.																	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	.	.	.	.	P	Y	L	E	G	V	A	E	K	S	A	D	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E
Query Conservation																											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																								.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	Y	A	A	N	T	E	L	A	K	I	A	A	I	V	D	W	I	N	I	M	T	Y	D	F	N	G	A	W	Q	K	I	S	A	H	N	A	P	L	N	Y	D	P	A	A	S	A	A	G	V	P	D	A	N	T	F	N	V	A	A	G	A	Q	G	H	L	D	A	G	V	P	A	A	K	L	V	L	G
Template Known Secondary structure		.	.					T	S									S	S									S	S		T	T	S	S	S				S	S		S	S								T	T		T	T	T	T	T		S												T			G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	Q	N	W	Q	K	N	G	Q	H	Q	A	I	S	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y	Y	P	D	N	F	L	H	N	Q	P	E	I	D	L	I	R	P	E	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	F	D	D	A	E	S	.	.	.	.	.	.	.	.	.	.	.	V	G	Y	K	T	A	Y	I	K	S	K	G	L	G	G	A	M	F	W	E	L	S	G	D	R	N	K	T	L	Q	N	K	L	K	A	D	L
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.												T									G	G	G		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.												.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions