Job Description P75906 Confidence 33.03% Date Thu Jan 5 12:15:53 GMT 2012 Rank 303 Aligned Residues 61 % Identity 13% Template d1cvra2 SCOP info Caspase-like Caspase-like Gingipain R (RgpB), N-terminal domain Resolution 2.00

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.			.	.	90	.	.	.	.										.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.							.	.								.	.	.	.	.	.	.	.	.						.	.	.
Query SS confidence																													.	.	.	.							.	.								.	.	.	.	.	.	.	.	.						.	.	.
Query Sequence		H	N	V	E	D	E	A	A	D	Q	R	F	M	S	V	R	T	S	A	L	R	E	Q	F	A	W	L	.	.	.	.	R	E	N	G	Y	Q	.	.	P	V	S	I	A	Q	I	.	.	.	.	.	.	.	.	.	R	E	A	H	R	.	.	.	G	G	K	P	L	P	E	K	A	V	V	L	T	F	D	D	G
Query Conservation																													.	.	.	.							.	.								.	.	.	.	.	.	.	.	.						.	.	.
Alig confidence																													.	.	.	.							.	.								.	.	.	.	.	.	.	.	.						.	.	.													.
Template Conservation																																																																													.
Template Sequence		Y	T	P	V	E	E	K	E	N	G	R	M	I	V	I	V	A	K	K	Y	E	G	D	I	K	D	F	V	D	W	K	N	Q	R	G	L	R	T	E	V	K	V	A	E	D	I	A	S	P	V	T	A	N	A	I	Q	Q	F	V	K	Q	E	Y	E	K	E	G	N	D	L	T	Y	V	L	L	.	V	G	D	H
Template Known Secondary structure									T	T									G	G	G	G	G	G											T	T													S	S																S	T	T									.		S		T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions