Job Description P75906 Confidence 98.03% Date Thu Jan 5 12:15:53 GMT 2012 Rank 40 Aligned Residues 126 % Identity 9% Template d1bf2a3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.											.	.	370	.	.	.	.	.	.	.	.	.	380	.													.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	.	.	.	.	.	.	.	.	.	.	V	W	F	P	N	R	L	L	P	M	K	A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	F	S	R	V	A	W	Q	L	R	T
Query Conservation																																				.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																																																.
Template Sequence		Y	G	A	G	L	K	A	S	Y	L	A	S	L	G	V	T	A	V	E	F	L	P	V	Q	E	T	Q	N	D	A	N	D	V	V	P	N	S	D	A	N	Q	N	Y	W	G	Y	M	T	E	N	Y	F	S	P	D	R	R	Y	A	Y	N	K	A	A	G	G	P	T	A	E	F	Q	A	M	V	Q	A	F	.	H
Template Known Secondary structure							T								T							S			B		B	S		T	T	T	T	S	S	T	T			T	T				S				B	S		S	S		B		G	G	G		S			S	T	T														.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.																								.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		N	A	G	I	K	V	.	.	.	.	.	Y	M	D	V	V	Y	N	H	T	A	E	G	G	T	W	T	S	S	D	P	T	T	A	T	I	Y	S	W	R	G	L	D	N	A	T	Y	Y	E	L	T	S	G	N	Q	Y	F	Y	D	N	T	G	I	G	A	N	F	N	T	Y	N	T	V	A	Q	N	L	I	V	D
Template Known Secondary structure			T	T				.	.	.	.	.							S	S		T	T		S	B	S	S	S	S		S	S		B			S	S										B		B		T	T	S	S	S	B			S	S	S	S	S			B		T	T	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	A	Y	W	A	N	T	M	G	V	D	G	F	R	F	D
Template Known Secondary structure									T	S								T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions