Job Description P75906 Confidence 94.45% Date Thu Jan 5 12:15:53 GMT 2012 Rank 178 Aligned Residues 136 % Identity 8% Template c3thdD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of human beta-galactosidase in complex with 1-2 deoxygalactonojirimycin Resolution 1.79 Å

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.						.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.
Predicted Secondary structure																																															.	.	.	.	.																									.	.	.
Query SS confidence																																															.	.	.	.	.																									.	.	.
Query Sequence		D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	.	.	.	.	.	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	.	.	.	W	D	L
Query Conservation																																															.	.	.	.	.																									.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.								.	.	.							.	.	.	.	.						.																			.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.								.	.	.																	.
Template Sequence		K	D	R	L	L	K	M	K	M	A	G	L	N	A	I	Q	T	Y	V	P	.	.	.	.	.	.	.	.	.	W	N	F	H	E	P	W	.	.	.	P	G	Q	Y	Q	F	S	E	D	H	D	V	E	Y	F	L	.	R	L	A	H	E	L	G	L	L	V	I	L	R	P	G	P	Y	I	C	A	E	W	E	M
Template Known Secondary structure											T	T		S								.	.	.	.	.	.	.	.	.						S	B	.	.	.	T	T	B				S	G	G	G							.						T	T									S				T	T	B	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.								.	.	.																	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.						.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																																			.	.	.	.	.															.	.
Query SS confidence																																																			.	.	.	.	.															.	.
Query Sequence		D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	.	.	.	.	.	A	F	D	G	I	L	F	H	D	D	A	L	L	S	.	.	D	Y	E	D	A	S	A	P	A	I
Query Conservation																																																			.	.	.	.	.															.	.
Alig confidence				.	.	.	.																			.	.	.	.																						.	.	.	.	.															.	.
Template Conservation				.	.	.	.																			.	.	.	.
Template Sequence		G	G	.	.	.	.	L	P	A	W	L	L	E	K	E	S	I	L	L	R	S	S	D	P	.	.	.	.	D	Y	L	A	A	V	D	K	W	L	G	V	L	L	P	K	M	K	P	L	L	Y	Q	N	G	G	P	V	I	T	V	Q	V	E	N	E	Y	G	S	Y	F	A	C	D	F	D	Y	L	R	F	L	Q
Template Known Secondary structure		G	G	.	.	.	.			G	G	G	G	G	S	T	T			S	S	S				.	.	.	.																		G	G	G	B	G	G	G	T	S	S							S	S		G	G	G	S	S
Template Predicted Secondary structure				.	.	.	.																			.	.	.	.
Template SS confidence
		133	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Y	Q	Q	A	G	F	S	G	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	F	R	H	H	L	G	D	D	V	V
Template Known Secondary structure										S	S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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