Job Description P75906 Confidence 96.68% Date Thu Jan 5 12:15:53 GMT 2012 Rank 144 Aligned Residues 80 % Identity 21% Template c3n92A_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-amylase, gh57 family; PDBTitle: crystal structure of tk1436, a gh57 branching enzyme from2 hyperthermophilic archaeon thermococcus kodakaraensis, in complex3 with glucose Resolution 2.89 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	V	R	E	V	A	R	S	R	L	V	E	L	A	S	H	T	W	N	S	H	Y	G	I	Q	A	N	A	T	G	S	L	L	P	V	Y	V	N	R	A	Y	F	T	D	H	A	R	Y	E	T	A	A	E	Y	R	E	R	I	R	L	D	A	V	K	M	T	E	Y	L	R	T	K	V	E	V	N	P	H	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	L	R	E	L	Q	D	Q	G	Y	V	E	V	I	T	S	A	A	T	H	G	Y	L	P	L	L	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	I	R	A	Q	I	A	N	G	V	A	T	Y	E	K	H	F	G	M	K	P	K	G
Template Known Secondary structure										T	T	S					B			T	T		B		G	G	G		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	S				B
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260																.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	W	P	Y	G	E	A	N	G	I	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	K	K	L	G	Y	D	M	F	F	T
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	W	L	P	E	C	A	Y	R	P	A	G	E	W	E	L	P	G	G	R	K	V	K	R	Q	G	I	E	K	F	L	E	E	F	G	L	R	Y	F	F	V
Template Known Secondary structure		B			G	G	G		B			S						T	T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions