Job Description P75906 Confidence 39.58% Date Thu Jan 5 12:15:53 GMT 2012 Rank 287 Aligned Residues 117 % Identity 15% Template c3mo4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-1,3/4-fucosidase; PDBTitle: the crystal structure of an alpha-(1-3,4)-fucosidase from2 bifidobacterium longum subsp. infantis atcc 15697 Resolution 1.90 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	.	.	.	.	.	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D
Query Conservation																																										.	.	.	.	.
Alig confidence																								.																		.	.	.	.	.																.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																						.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	D	Q	W	X	D	A	L	V	A	G	G	X	A	G	V	I	L	T	C	K	.	H	H	D	G	F	C	L	W	P	S	R	L	T	R	H	T	V	A	S	S	P	W	R	E	G	K	G	D	L	V	R	E	V	S	E	S	A	.	R	R	H	G	L	K	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T		S								.		T	T			B	S	S			T	T		S	S	B	G	G	G	S	S	G	G	G	G	T												.			T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																						.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.										440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																				.
Query SS confidence																																.	.	.	.	.	.	.	.	.																				.
Query Sequence		P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	.	.	.	.	.	.	.	.	.	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	.	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P
Query Conservation																																.	.	.	.	.	.	.	.	.																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	Y	L	S	P	W	D	R	T	E	E	S	Y	G	K	G	K	A	Y	D	D	F	Y	V	G	Q	L	T	E	L	L	T	Q	Y	G	P	I	F	S	V	W	L	D	G	A	N	G	E	G	K	N	G	K	T	Q	Y	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S			S	S		T	T	T	T	S	S																	S	S	S			S										B		T	T	S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	A	Y	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	D	R	Y	Y	N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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