Job Description P75906 Confidence 98.14% Date Thu Jan 5 12:15:53 GMT 2012 Rank 31 Aligned Residues 174 % Identity 15% Template c3mi6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11. Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																								.
Query SS confidence																												.	.																								.
Query Sequence		D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	.	.	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	.	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D
Query Conservation																												.	.																								.
Alig confidence																								.	.	.		.	.																								.									.
Template Conservation																								.	.	.																																				.
Template Sequence		E	A	K	L	X	T	I	V	N	Q	A	K	R	L	G	I	E	X	F	V	L	D	.	.	.	D	G	W	F	G	H	R	D	D	D	T	T	S	L	G	D	W	F	V	D	Q	R	K	F	P	D	G	I	E	H	F	S	Q	A	V	.	H	Q	Q	G	X	K	F	G	L	W	F	E	P	E	X	V	S	V	D
Template Known Secondary structure																T								.	.	.	T	T		B	T	T		S	S	T	T	S		T	T			S	B		T	T	T		T	T										.			T	T									T	T				S	S
Template Predicted Secondary structure																								.	.	.																																				.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure		.																										.
Query SS confidence		.																										.
Query Sequence		.	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	.	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A
Query Conservation		.																										.
Alig confidence		.																										.																															.	.															.	.	.	.	.	.	.
Template Conservation																																																											.	.															.	.	.	.	.	.	.
Template Sequence		S	D	L	Y	Q	Q	H	P	D	W	L	I	H	A	P	K	S	T	P	T	P	G	R	H	Q	F	V	L	D	X	A	R	P	E	V	V	D	Y	L	F	K	L	X	S	Q	X	I	E	S	A	N	L	D	Y	I	K	W	.	.	D	X	N	R	Y	A	T	E	X	F	S	S	R	L	.	.	.	.	.	.	.
Template Known Secondary structure		S	S						G	G	G	B				T	T						S	S	S				B		T	T																				T		S					.	.				S				S				S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.															.	.	.	.	.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	T	S	D	Q	Q	L	E	L	P	H	R	Y	I	L	G	.	.	.	.	.	V	Y	Q	L	Y	A	R	L	T	Q	.	A	Y	P	N	V	L	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G									.	.	.	.	.											.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.											.
Template SS confidence
												493	.	.	.	.	.	.	500	.	.	.	.	.	.	.						.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions