Job Description P75906 Confidence 51.55% Date Thu Jan 5 12:15:53 GMT 2012 Rank 267 Aligned Residues 219 % Identity 10% Template c3lutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:voltage-gated potassium channel subunit beta-2; PDBTitle: a structural model for the full-length shaker potassium channel kv1.2 Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																				.	.	.	.																				.	.	.
Query SS confidence																				.	.	.	.																				.	.	.
Query Sequence		V	K	M	T	E	Y	L	R	T	K	V	E	V	N	P	H	V	F	.	.	.	.	V	W	P	Y	G	E	A	N	G	I	A	I	E	E	L	K	K	L	G	.	.	.	Y	D	M	F	F	T	L	E	S	G	L	A	N	A	S	Q	L	D	S	I	P	R	V	L	I	A	N	N	P	S	L	K	E	F	A	Q
Query Conservation																				.	.	.	.																				.	.	.
Alig confidence																				.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		E	M	A	E	H	L	M	T	L	A	Y	D	N	G	I	N	L	F	D	T	A	E	V	Y	A	A	G	K	A	E	V	V	L	G	N	I	I	K	K	K	G	W	R	R	S	S	L	V	I	T	T	K	I	F	W	G	G	K	A	E	T	E	.	.	.	.	.	.	.	.	R	G	L	S	R	K	H	I	I	E
Template Known Secondary structure														T	T								T	T	G	G	G	G														T			G	G	G								S	B			S	S	G	G	G	.	.	.	.	.	.	.	.	B	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.											.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	I	T	V	Q	E	K	S	P	Q	R	I	M	H	I	D	L	D	Y	V	Y	D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	.	.	.	.	.	.	.	.	.	.	D	G	L	V	K	E	V	W	F	P	N	R
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.
Template Sequence		G	L	K	A	S	L	E	R	.	.	L	Q	L	E	Y	V	D	V	V	F	A	N	R	P	D	P	N	T	P	M	E	E	T	V	R	A	M	T	H	V	I	N	Q	G	M	A	M	Y	W	G	T	S	R	W	S	S	M	E	I	M	E	A	Y	S	V	A	R	Q	F	N	L	I	P	P	I	C	E	Q	A	E
Template Known Secondary structure										.	.		T		S								S	S			T	T	S															T	T	S								S																	T
Template Predicted Secondary structure										.	.
Template SS confidence
		139	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		Y	H	M	F	Q	R	E	K	V	E	V	Q	L	P	E	L	F	H	K	I	G	V	G	A	M	T	W	S	.	P	L	A	C	G	I	V	S	G	K	Y	D	S	G	I	P	P	Y	S	R	A	S	L	K	G	Y	Q	W	L	K	D	K	I	L	S	E	E	G	R	R	Q	Q	A	K	L	K	E	L	Q	A	I
Template Known Secondary structure			B	T	T	B						T																		.	T	T	G	G	G	G	G	G	T	T	T	T	T	S			T	T	S	G	G	G	S	T	T									T	S
Template Predicted Secondary structure																														.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		454	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	H	A	A	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	L	G	C	T
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions