Job Description P75906 Confidence 21.97% Date Thu Jan 5 12:15:53 GMT 2012 Rank 363 Aligned Residues 210 % Identity 10% Template c3kwsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution Resolution 1.68 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	Q	F	A	W	L	R	E	N	G	Y	Q	P	V	S	I	A	Q	I	R	E	A	H	R	G	G	K	P	L	P	E	K	A	V	V	L	T	F	D	D	G	Y	Q	S	F	Y	T	R	V	F	P	I	L	Q	A	F	Q	W	P	A	V	W	A	P	V	G	S	W	V	D	T	P	A	D	K	Q	V	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Sequence		L	N	E	K	L	D	F	X	E	K	L	G	V	V	G	F	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	L	A	G	R	V	N	E	I	K	Q	A	L	N	G	R	N	I	K	V	S	A	I	C	A	G	F	K	G	F	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S	T	T													T	T	S	S												S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	E	L	V	D	R	E	Y	F	A	T	W	Q	Q	V	R	E	V	A	R	S	R	L	V	E	L	A	S	H	T	W	N	S	H	Y	G	I	Q	A	N	A	T	G	S	L	L	P	V	Y	V	N	R	A	Y	F	T	D	H	A	R	Y	E	T	A	A	E	Y	R	E	R	I	R	L	D	A	V	K	M
Query Conservation
Alig confidence		.																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	I	L	S	T	D	P	A	I	R	K	E	C	X	D	T	X	K	E	I	I	A	A	A	.	G	E	L	G	S	T	G	V	I	I	V	P	A	F	N	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	L	P	H	T	X	E	T	R	D	F	L	C	E	Q	F	N	E	X
Template Known Secondary structure		.	T	T	B	S	S																			.			T	T		S						S			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B			S	S
Template Predicted Secondary structure		.																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																				.
Query SS confidence																			.	.	.	.	.																				.
Query Sequence		T	E	Y	L	R	T	K	V	E	V	N	P	H	V	F	V	W	.	.	.	.	.	P	Y	G	E	A	N	G	I	A	I	E	E	L	K	K	L	G	Y	D	.	M	F	F	T	L	E	S	G	L	A	N	A	S	Q	L	D	S	I	P	R	V	L	I	A	N	N	P	S	L	K	E	F	A	Q	Q	I	I	T
Query Conservation																			.	.	.	.	.																				.
Alig confidence								.											.	.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation								.																																													.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		G	T	F	A	A	Q	.	H	G	T	S	V	I	F	E	P	L	N	R	K	E	C	F	Y	L	R	Q	V	A	D	A	A	S	L	C	R	D	I	N	N	P	G	V	R	C	X	G	D	F	W	H	.	.	.	.	.	.	.	.	.	.	.	.	X	T	W	E	E	T	S	D	X	G	A	F	I	S	G	G	.
Template Known Secondary structure								.	T	T										T	T	T		S	S																	T	T										.	.	.	.	.	.	.	.	.	.	.	.						S										G	.
Template Predicted Secondary structure								.																																													.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		177	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.													.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		308	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	Q	E	K	S	P	Q	R	I	M	H	I	.	D	L	D	Y	V	Y	D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S
Query Conservation														.
Alig confidence		.	.	.	.									.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	Y	L	Q	H	V	H	V	A	S	R	K	R	R	S	X	P	G	E	D	G	D	A	D	N	Y	I	N	G	F	K	G	L	K	X	I	G	Y	N
Template Known Secondary structure		.	.	.	.	G	G									T	T	T	S	S	S	T	T	T	T	G	G	G													T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions