Job Description P75906 Confidence 66.87% Date Thu Jan 5 12:15:53 GMT 2012 Rank 239 Aligned Residues 187 % Identity 12% Template c3iuuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative metallopeptidase; PDBTitle: crystal structure of putative metallopeptidase (yp_676511.1) from2 mesorhizobium sp. bnc1 at 2.13 a resolution Resolution 2.13 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	K	T	A	E	A	L	G	Y	R	C	V	P	S	I	S	A	R	A	R	P	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	E	Q	K	V	F	D	N	I	V	D	E	F	V	Q	A	A	R	X	Q	D	F	D	A	I	C	L	D
Template Known Secondary structure									T	T													S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B																			S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	G	A	T	L	A	E	H	T	L	D	T	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	S	R	L	R	E	V	V	G	N	D	I	X	I	S	L	A	L	D	L	H	A	Y	L
Template Known Secondary structure				S				B	S	S		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	S								T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.																																								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.				.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G	V	A	E	K	S	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E	.	.	.	L	Q	A	Q	N	W	Q	K	N	G	Q	H	Q	A	I
Query Conservation																																																																.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.											.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		T	P	Q	X	V	E	Q	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	T	S	F	R	T	T	P	H	A	D	I	E	E	T	G	V	R	A	X	T	L	L	D	S	L	S	N	E	T	R	P	P	R	A	I	Y	S	L	I	P	F	L	T	R	G	N	D	E	T	W	S	.	.	.	.	G
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S																		T	T	T		S	S											B			B	S				S	S	S	.	.	.	.	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.														.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.		.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	.	G	V	K	N	Y	G	Y	Y	P	D	N	F	L	H	N	Q	P	E
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		P	L	A	E	I	G	A	A	A	D	R	W	R	A	R	S	D	V	V	D	L	S	I	F	N	V	H	P	F	L	D	V	P	G
Template Known Secondary structure															T	S	T	T											T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions