Job Description P75906 Confidence 20.82% Date Thu Jan 5 12:15:53 GMT 2012 Rank 371 Aligned Residues 60 % Identity 20% Template c3i08C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:neurogenic locus notch homolog protein 1; PDBTitle: crystal structure of the s1-cleaved notch1 negative2 regulatory region (nrr) Resolution 3.20 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	K	S	P	Q	R	I	M	H	I	D	L	D	Y	V	Y	D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L
Query Conservation
Alig confidence																																																	.	.					.	.	.	.
Template Conservation																																																	.	.					.	.	.	.
Template Sequence		A	E	H	V	P	E	R	L	A	A	G	T	L	V	V	V	V	L	M	P	P	E	Q	L	R	N	S	S	F	H	F	L	R	E	L	S	R	V	L	H	T	N	V	V	F	K	R	.	.	D	A	H	G	.	.	.	.	Q	Q	M	I	F	P	Y	Y	G
Template Known Secondary structure			T	T	S						S	S							S	S								T													T	S						B	.	.		T	T		.	.	.	.		B
Template Predicted Secondary structure																																																	.	.					.	.	.	.
Template SS confidence
		1563	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.			1610	.	.	.					.	.	.	.	.	.	1620	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions