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Job DescriptionP75906
Confidence97.55%DateThu Jan 5 12:15:53 GMT 2012
Rank107Aligned Residues132
% Identity13%Templatec3faxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:reticulocyte binding protein; PDBTitle: the crystal structure of gbs pullulanase sap in complex with2 maltotetraose
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   334.....340.........350........ .360.. .......370. ........380......
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Query Sequence  RNIDVLIQRVKDMQISTVYLQAFAD. PDGD. . . . . . . . . . . . . . . . . . . GLVKEVWFP. . NRLLPMKADIFSRVA. . . . .
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Template Sequence  AAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQL
Template Known Secondary structure  TT
SS

B
BSS
BTT





S

SSS
S


S
SBS
SSSB
GGG
S
TTS
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   641........650.........660.........670.........680.........690.........700.........710.........720
 
   387..390.........400. ........410.........420.........430.... .....440.........450.........460...
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Query Sequence  WQLRTRSGVNIYAWM. . PVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHR. LSPFDDRVRAQVGMLYEDLAGHAAFDGIL
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Template Sequence  IHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSEFKVDGFR
Template Known Secondary structure  TT


S

S
TTTSTTTSB
B
TTS
B
BSSSSB
B
TTSS


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   721........730.........740.........750.........760.........770.........780.........790.........800
 
   464.
Predicted Secondary structure 
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Query Sequence  FH
Query Conservation 
 
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Template Conservation   
Template Sequence  FD
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

   801.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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